Kévin Rue-Albrecht
Rendered fromVcfFilterRules.Rmd
in TVTB 1.31.1.gDR team
Rendered fromgDRutils.Rmd
in gDRutils 1.3.3.Sean K. Maden, Stephanie C. Hicks
Rendered fromlute_algorithm_classes.Rmd
in lute 1.1.0.Sean K. Maden, Stephanie C. Hicks
Rendered fromlute_users_guide.Rmd
in lute 1.1.0.Yun Peng
Rendered fromFAERS-Pharmacovigilance.Rmd
in faers 1.1.3.Hervé Pagès
Rendered fromSparseArray_objects.Rmd
in SparseArray 1.5.14.Author: Le Zhang, Daniela Cassol, and Thomas Girke
Rendered fromsystemPipeR.Rmd
in systemPipeR 2.11.2.Oliver M. Crook
Rendered fromqc-streamlined.Rmd
in hdxmsqc 1.1.1.Niloofar Aghaieabiane
Rendered fromSGCP.Rmd
in SGCP 1.5.2.Tuomas Borman
Rendered fromHoloFoodR.Rmd
in HoloFoodR 0.99.8.Daniel Sabanés Bové, Namrata Bhatia, Stefanie Bienert, Benoit Falquet, Haocheng Li, Jeff Luong, Lyndsee Midori Zhang, Alex Richardson, Simona Rossomanno, Tim Treis, Mark Yan, Naomi Chang, Chendi Liao, Carolyn Zhang, Joseph N. Paulson
Rendered fromhermes.Rmd
in hermes 1.9.1.Thomas Naake and Wolfgang Huber
Rendered fromMatrixQCvis.Rmd
in MatrixQCvis 1.13.5.Asya Khleborodova, Sehyun Oh, Ludwig Geistlinger, and Levi Waldron
Rendered fromlefser.Rmd
in lefser 1.15.3.Silvia Giulia Galfrè
Rendered fromGuided_tutorial_v2.Rmd
in COTAN 2.5.6.Hani Jieun Kim
Rendered fromcepo.Rmd
in Cepo 1.11.2.Ghislain FIEVET [email protected]
Rendered fromvign01_adverSCarial.Rmd
in adverSCarial 1.3.5.Hangjia Zhao
Rendered fromIntroduction_1_loadmetadata.Rmd
in pgxRpi 1.1.4.Steffen Durinck, Wolfgang Huber, Mike Smith
Rendered fromaccessing_other_marts.Rmd
in biomaRt 2.61.2.Aaron Lun
Rendered fromResidualMatrix.Rmd
in ResidualMatrix 1.15.1.Helena L Crowell, Mark D Robinson
Rendered fromdifferential.Rmd
in CATALYST 1.29.1.Simo Kitanovski ([email protected])
Rendered fromUser_manual.Rmd
in scBubbletree 1.7.16.Shijie C. Zheng, Andrew E. Teschendorff
Rendered fromEpiDISH.Rmd
in EpiDISH 2.21.1.Zhezhen Wang, Andrew Goldstein, Yuxi Sun, Biniam Feleke, Qier An, Antonio Feliciano, Ieva Tolkaciovaite, and Xinan H Yang
Rendered fromBioTIP.Rmd
in BioTIP 1.19.0.Tuomas Borman
Rendered frommia.Rmd
in mia 1.13.23.Jeanette Johnson, Ashley Tsang, Thomas Sherman, Genevieve Stein-O'Brien, Hyejune Limb, Elana Fertig
Rendered fromCoGAPS.Rmd
in CoGAPS 3.25.1.Jianhong Ou, Lihua Julie Zhu
Rendered fromlollipopPlot.Rmd
in trackViewer 1.41.3.José Antonio Bernabé-Díaz, Manuel Franco, Juana-María Vivo, Manuel Quesada-Martínez, Astrid Duque-Ramos, Jesualdo Tomás Fernández-Breis
Rendered frommanual.Rmd
in evaluomeR 1.21.6.Bioconductor Package Maintainer
Rendered fromKEGGREST-vignette.Rmd
in KEGGREST 1.45.1.Alex Cornish
Rendered fromSANTA-vignette.Rmd
in SANTA 2.41.2.Xiaosai Yao
Rendered frommultiome.mae.Rmd
in epiregulon 1.1.2.Yasir Rahmatallah
Rendered fromGSAR.Rnw
in GSAR 1.39.2.Hangjia Zhao
Rendered fromIntroduction_2_loadvariants.Rmd
in pgxRpi 1.1.4.Hangjia Zhao
Rendered fromIntroduction_3_loadfrequency.Rmd
in pgxRpi 1.1.4.Hangjia Zhao
Rendered fromIntroduction_4_process_pgxseg.Rmd
in pgxRpi 1.1.4.Sonia Tarazona
Rendered fromMOSim.Rnw
in MOSim 2.1.0.Zongli Xu, Liang Niu, Jack Taylor
Rendered fromENmix.Rmd
in ENmix 1.41.2.Hemi Luan
Rendered fromstatTarget.Rmd
in statTarget 1.35.1.Federico Marini
Rendered fromgoseq.Rnw
in goseq 1.57.2.Alvaro Cuadros-Inostroza
Rendered fromRICorrection.Rnw
in TargetSearch 2.7.1.Alvaro Cuadros-Inostroza
Rendered fromTargetSearch.Rnw
in TargetSearch 2.7.1.Nicolas Canete, Ellis Patrick
Rendered fromlisaClust.Rmd
in lisaClust 1.13.1.Marc Carlson, Patrick Aboyoun, Hervé Pagès, and Martin Morgan
Rendered fromGenomicRangesIntroduction.Rmd
in GenomicRanges 1.57.1.Hervé Pagès
Rendered fromGenomicRangesHOWTOs.Rnw
in GenomicRanges 1.57.1.AlpsNMR authors
Rendered fromVig01b-introduction-to-alpsnmr-old-api.Rmd
in AlpsNMR 4.7.1.AlpsNMR authors
Rendered fromVig01-introduction-to-alpsnmr.Rmd
in AlpsNMR 4.7.1.William Kumler
Rendered fromintro_to_squallms.Rmd
in squallms 0.99.6.Marc Carlson, Beryl Kanali
Rendered fromMultipleAlignments.Rmd
in Biostrings 2.73.1.Aditya Bhagwat
Rendered fromautonomics_platformaware_analysis.Rmd
in autonomics 1.13.19.Author: Quinlan Furumo
Rendered fromPIPETS.Rmd
in PIPETS 1.1.1.Ben Laufer
Rendered fromscDotPlot.Rmd
in scDotPlot 0.99.3.Marcel Ramos
Rendered fromTENxIO.Rmd
in TENxIO 1.7.1.Haakon Tjeldnes & Kornel Labun
Rendered fromAnnotation_Alignment.Rmd
in ORFik 1.25.3.Haakon Tjeldnes & Kornel Labun
Rendered fromORFikExperiment.Rmd
in ORFik 1.25.3.Haakon Tjeldnes & Kornel Labun
Rendered fromORFikOverview.Rmd
in ORFik 1.25.3.Christian Arnold
Rendered fromGRaNIE_packageDetails.Rmd
in GRaNIE 1.9.1.Christian Arnold
Rendered fromGRaNIE_singleCell_eGRNs.Rmd
in GRaNIE 1.9.1.Rishi Das Roy
Rendered frombroadSeq.Rmd
in broadSeq 0.99.3.Dany Mukesha
Rendered fromIntroduction.Rmd
in BioGA 0.99.6.Simeon Lim Rossmann
Rendered fromggseqalign.Rmd
in ggseqalign 0.99.1.Vinh Tran
Rendered fromPhyloProfile-vignette.Rmd
in PhyloProfile 1.19.4.Arman Shahrisa
Rendered fromcbaf.Rmd
in cbaf 1.27.4.Erik Wright
Rendered fromRepeatRepeat.Rnw
in DECIPHER 3.1.4.Developed by Gabriel Hoffman
Rendered fromdream.Rmd
in variancePartition 1.35.4.Damian Szklarczyk
Rendered fromSTRINGdb.Rnw
in STRINGdb 2.17.3.Kevin Rue-Albrecht, Aaron Lun, Charlotte Soneson
Rendered fromvelociraptor.Rmd
in velociraptor 1.15.4.Andy An, Travis Blimkie
Rendered frompathlinkR.Rmd
in pathlinkR 1.1.12.Johannes Rainer
Rendered fromcreate-compounddb.Rmd
in CompoundDb 1.9.1.Johannes Rainer
Rendered fromCompoundDb-usage.Rmd
in CompoundDb 1.9.1.Vanja Haberle, Charles Plessy, Sarvesh Nikumbh
Rendered fromCAGEexp.Rmd
in CAGEr 2.11.3.Tomoyuki Furuta, Institute of Plant Science and Resources, Okayama University, Okayama, Japan, [email protected]
Rendered fromBasicUsageOfGBScleanR.rmd
in GBScleanR 1.9.20.Qian Liu
Rendered fromVariantExperiment-class.Rmd
in VariantExperiment 1.19.2.Qian Liu, Hervé Pagès, Martin Morgan
Rendered fromGDSArray.Rmd
in GDSArray 1.25.2.RforMassSpectrometry Package Maintainer
Rendered fromSpectra.Rmd
in Spectra 1.15.3.gDR team
Rendered fromgDRimport.Rmd
in gDRimport 1.3.2.W. Evan Johnson, Jessica McClintock
Rendered fromBatchQC_Intro.Rmd
in BatchQC 2.1.2.Leonardo Collado-Torres
Rendered fromrecount-quickstart.Rmd
in recount 1.31.2.Jianhong Ou, Lihua Julie Zhu
Rendered fromplotInteractionData.Rmd
in trackViewer 1.41.3.Alexander Nicholls, Ellis Patrick, Nicolas Canete
Rendered fromsimpleSeg.Rmd
in simpleSeg 1.7.1.Erik Wright
Rendered fromDECIPHERing.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromSearchForResearch.Rnw
in DECIPHER 3.1.4.Nicolas Canete, Ellis Patrick
Rendered fromspicyR.Rmd
in spicyR 1.17.1.Siyuan Ma
Rendered fromMMUPHin.Rmd
in MMUPHin 1.19.1.Joseph R Boyd
Rendered fromseqsetvis_overview.Rmd
in seqsetvis 1.25.2.Belinda Phipson and Jovana Maksimovic
Rendered frommissMethyl.Rmd
in missMethyl 1.39.13.Vanja Haberle, Charles Plessy
Rendered fromCAGE_Resources.Rmd
in CAGEr 2.11.3.Hervé Pagès
Rendered fromA-Working_with_large_arrays.Rnw
in DelayedArray 0.31.5.Hervé Pagès
Rendered fromB-Implementing_a_backend.Rmd
in DelayedArray 0.31.5.Hervé Pagès
Rendered fromC-DelayedArray_HDF5Array_update.Rnw
in DelayedArray 0.31.5.Kylie Ariel Bemis
Rendered fromCardinal3-guide.Rmd
in Cardinal 3.7.1.Erik Wright
Rendered fromDesignProbes.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromArtOfAlignmentInR.Rnw
in DECIPHER 3.1.4.Lucas Etourneau, Samuel Wieczorek"
Rendered fromPirat.Rmd
in Pirat 0.99.26.Marek Gierlinski
Rendered fromfenr.Rmd
in fenr 1.3.1.Kylie Ariel Bemis
Rendered fromCardinal3-stats.Rmd
in Cardinal 3.7.1.gDR team
Rendered fromgDR-annotation.Rmd
in gDRcore 1.3.2.Mirko Brüggemann, Kathi Zarnack
Rendered fromvignette.Rmd
in BindingSiteFinder 2.3.1.Hervé Pagès
Rendered fromBiostringsQuickOverview.Rnw
in Biostrings 2.73.1.Hervé Pagès
Rendered fromPairwiseAlignments.Rnw
in Biostrings 2.73.1.Constantin Ahlmann-Eltze
Rendered fromIntroduction.Rmd
in lemur 1.3.2.Erik Wright
Rendered fromGrowingTrees.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromClusteringSequences.Rnw
in DECIPHER 3.1.4.Marcel Ramos
Rendered fromBiocCheck.Rmd
in BiocCheck 1.41.3.Tuomas Borman
Rendered frommiaViz.Rmd
in miaViz 1.13.2.Robert Castelo, Axel Klenk, Justin Guinney
Rendered fromGSVA.Rmd
in GSVA 1.53.3.Carolina Monzó, Ángeles Arzalluz-Luque, Arianna Febbo, Sonia Tarazona
Rendered fromscMOSim.Rmd
in MOSim 2.1.0.Hervé Pagès
Rendered fromS4Arrays_quick_overview.Rmd
in S4Arrays 1.5.3.Annekathrin Silvia Nedwed, Federico Marini
Rendered fromGeDi_manual.Rmd
in GeDi 1.1.1.W. Evan Johnson, Jessica McClintock, Solaiappan Manimaran
Rendered fromBatchQC_examples.Rmd
in BatchQC 2.1.2.Laurent Gatto
Rendered fromQFeatures.Rmd
in QFeatures 1.15.2.Patrick Aboyoun, Michael Lawrence, Hervé Pagès
Rendered fromS4VectorsOverview.Rmd
in S4Vectors 0.43.1.Marc Carlson, Patrick Aboyoun, Hervé Pagès, Seth Falcon, Martin Morgan
Rendered fromtxdbmaker.Rmd
in txdbmaker 1.1.1.Laurent Gatto
Rendered fromVisualization.Rmd
in QFeatures 1.15.2.Laurent Gatto
Rendered fromProcessing.Rmd
in QFeatures 1.15.2.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered frombigdata.Rmd
in iSEE 2.17.1.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered fromvoice.Rmd
in iSEE 2.17.1.Bárbara Zita Peters Couto, Nick Robertson, Mu-Wei Chung, Ellis Patrick, Shila Ghazanfar
Rendered fromMoleculeExperiment.Rmd
in MoleculeExperiment 1.5.1.Aaron Lun
Rendered fromuserguide.Rmd
in gypsum 1.1.6.Helena L Crowell, Vito RT Zanotelli, Stéphane Chevrier, Bernd Bodenmiller, Mark D Robinson
Rendered frompreprocessing.Rmd
in CATALYST 1.29.1.William Hutchison, Stefano Mangiola
Rendered fromoverview.Rmd
in tidySpatialExperiment 1.1.1.Jinjin Chen
Rendered fromsmartid_Demo.Rmd
in smartid 1.1.2.Zuguang Gu ([email protected])
Rendered fromsimona.Rmd
in simona 1.3.1.Attila Gabor, Alberto Valdeolivas, Julio Saez-Rodriguez
Rendered fromdrug_targets.Rmd
in OmnipathR 3.13.1.Alberto Valdeolivas, Attila Gabor, Denes Turei, Julio Saez-Rodriguez
Rendered fromomnipath_intro.Rmd
in OmnipathR 3.13.1.Fernando Sola, Daniel Ayala, Marina Pulido, Rafael Ayala, Lorena López-Cerero, Inma Hernández, David Ruiz
Rendered fromginmappeR.Rmd
in ginmappeR 1.1.2.Sean K. Maden
Rendered fromlute_pseudobulk_example.Rmd
in lute 1.1.0.Michael I. Love, Charlotte Soneson, Peter F. Hickey, Rob Patro
Rendered fromtximeta.Rmd
in tximeta 1.23.2.Marco Guazzini, Alexander G. Reisach, Sebastian Weichwald, Christof Seiler
Rendered fromspillR-vignette.Rmd
in spillR 1.1.1.Jianhong Ou
Rendered fromscRNAseqApp.Rmd
in scRNAseqApp 1.5.7.Jermiah Joseph, Bartosz Czech
Rendered fromConvertingPharmacoSetToGDR.Rmd
in gDRimport 1.3.2.Michael Stadler, Dimos Gaidatzis, Charlotte Soneson, Anita Lerch
Rendered fromQuasR.Rmd
in QuasR 1.45.1.gDR team
Rendered fromgDRcore.Rmd
in gDRcore 1.3.2.Stevie Pederson
Rendered frommotifAnalysis.Rmd
in motifTestR 1.1.3.RforMassSpectrometry Package Maintainer
Rendered fromMsBackend.Rmd
in Spectra 1.15.3.RforMassSpectrometry Package Maintainer
Rendered fromSpectra-large-scale.Rmd
in Spectra 1.15.3.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.base 1.5.3.Aaron Lun
Rendered frommisc.Rmd
in scuttle 1.15.1.gDR team
Rendered fromgDRstyle.Rmd
in gDRstyle 1.3.2.Philippe Hauchamps, Laurent Gatto
Rendered fromCytoPipeline.Rmd
in CytoPipeline 1.5.1.Jermiah Joseph, Bartosz Czech
Rendered fromConvertingMAEtoPharmacoSet.Rmd
in gDRimport 1.3.2.Jianhong Ou, Lihua Julie Zhu
Rendered fromchangeTracksStyles.Rmd
in trackViewer 1.41.3.Aaron Lun, Jared M. Andrews, Friederike Dündar, Daniel Bunis
Rendered fromSingleR.Rmd
in SingleR 2.7.1.Kinnary H. Shah, Boyi Guo, Stephanie C. Hicks
Rendered fromspoon.Rmd
in spoon 1.1.3.Nitesh Turaga, Vincent Carey, BJ Stubbs, Marcel Ramos, Martin Morgan
Rendered fromIntroduction.Rmd
in AnVIL 1.17.6.gDR team
Rendered fromstyle_guide.Rmd
in gDRstyle 1.3.2.Wolfgang Huber, Robert Gentleman
Rendered frommatchprobes.Rmd
in Biostrings 2.73.1.Erik Wright
Rendered fromDesignPrimers.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromDesignMicroarray.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromDesignSignatures.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromFindChimeras.Rnw
in DECIPHER 3.1.4.Jianhong Ou, Lihua Julie Zhu
Rendered fromtrackViewer.Rmd
in trackViewer 1.41.3.gDR team
Rendered fromgDR-data-model.Rmd
in gDRcore 1.3.2.Noriaki Sato
Rendered fromusage_of_ggkegg.Rmd
in ggkegg 1.3.2.MultiAssay Special Interest Group
Rendered fromMultiAssayExperiment.Rmd
in MultiAssayExperiment 1.31.3.Vincent J. Carey, stvjc at channing.harvard.edu, Shweta Gopaulakrishnan, reshg at channing.harvard.edu, Samuela Pollack, spollack at jimmy.harvard.edu
Rendered fromBiocSklearn.Rmd
in BiocSklearn 1.27.1.Developed by Gabriel Hoffman
Rendered fromerrors.Rmd
in dreamlet 1.3.1.Jianhong Ou, Kai Hu, Haibo Liu, Junhui Li, Jun Yu, Lihua Julie Zhu
Rendered fromChIPpeakAnno.Rmd
in ChIPpeakAnno 3.39.1.Mike L. Smith, Steffen Durinck, Wolfgang Huber
Rendered fromaccessing_ensembl.Rmd
in biomaRt 2.61.2.gDR team
Rendered fromgDR.Rmd
in gDR 1.3.1.Developed by Gabriel Hoffman
Rendered fromdreamlet.Rmd
in dreamlet 1.3.1.Erik Wright
Rendered fromFindingGenes.Rnw
in DECIPHER 3.1.4.Pierre-Luc Germain
Rendered fromscDblFinder.Rmd
in scDblFinder 1.19.1.Shian Su, Vince Carey, Marcel Ramos, Lori Shepherd, Martin Morgan, Sean Davis
Rendered fromBiocPkgTools.Rmd
in BiocPkgTools 1.23.1.Shuye Pu
Rendered fromGenomicPlot_vignettes.rmd
in GenomicPlot 1.3.3.Martin Morgan, Valerie Obenchain, Jim Hester, Hervé Pagès
Rendered fromSummarizedExperiment.Rmd
in SummarizedExperiment 1.35.1.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.spatial 1.5.1.Kayla Interdonato, Yubo Cheng, Martin Morgan
Rendered fromRunningWorkflow.Rmd
in AnVIL 1.17.6.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.sce 1.5.1.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.se 1.5.2.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.matrix 1.5.4.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered frombasic.Rmd
in iSEE 2.17.1.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered fromlinks.Rmd
in iSEE 2.17.1.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered fromconfigure.Rmd
in iSEE 2.17.1.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered fromecm.Rmd
in iSEE 2.17.1.Kevin Rue-Albrecht, Federico Marini, Charlotte Soneson, Aaron Lun
Rendered fromcustom.Rmd
in iSEE 2.17.1.Amrisha Bhosle, Ludwig Geistlinger, Sagun Maharjan
Rendered fromMacarron.Rmd
in Macarron 1.9.1.Jordy Bollon, Simone Tiberi
Rendered fromIsoBayes.Rmd
in IsoBayes 1.3.2.Aaron Lun
Rendered fromuserguide.Rmd
in alabaster.ranges 1.5.2.Dario Strbenac, Ellis Patrick, Graham Mann, Jean Yang, John Ormerod <br> The University of Sydney, Australia.
Rendered fromClassifyR.Rmd
in ClassifyR 3.9.2.Yuzhou Feng
Rendered fromcell-colocalisation.Rmd
in SPIAT 1.7.1.Developed by Gabriel Hoffman
Rendered fromcell_covs.Rmd
in dreamlet 1.3.1.Christian Arnold
Rendered fromGRaNIE_workflow.Rmd
in GRaNIE 1.9.1.Lachlan Baer, Stevie Pederson
Rendered fromdar.Rmd
in tadar 1.3.1.Peter Hickey
Rendered fromDelayedMatrixStatsOverview.Rmd
in DelayedMatrixStats 1.27.1.Lasse Meyer, Nils Eling
Rendered fromcytoviewer.Rmd
in cytoviewer 1.5.0.Erik Wright
Rendered fromClassifySequences.Rnw
in DECIPHER 3.1.4.Erik Wright
Rendered fromFindingNonCodingRNAs.Rnw
in DECIPHER 3.1.4.Gavin R Lloyd, Ralf J Weber
Rendered fromexample_using_structToolbox.Rmd
in metabolomicsWorkbenchR 1.15.2.Gavin R Lloyd, Ralf J Weber
Rendered fromIntroduction_to_metabolomicsWorkbenchR.Rmd
in metabolomicsWorkbenchR 1.15.2.Pierre-Luc Germain
Rendered fromsechm.Rmd
in sechm 1.13.1.Ning Liu, Melissa Davis
Rendered fromQuick_start.Rmd
in hoodscanR 1.3.1.Developed by Gabriel Hoffman
Rendered fromerrors.Rmd
in variancePartition 1.35.4.Developed by Gabriel Hoffman
Rendered fromFAQ.Rmd
in variancePartition 1.35.4.Developed by Gabriel Hoffman
Rendered frommvtests.Rmd
in variancePartition 1.35.4.Tyler Gorrie-Stone, Leonard Schalkwyk
Rendered fromwateRmelon.Rmd
in wateRmelon 2.11.2.Ghislain FIEVET
Rendered fromvign02_overView_analysis.Rmd
in adverSCarial 1.3.5.Ghislain FIEVET
Rendered fromvign03_adapt_classifier.Rmd
in adverSCarial 1.3.5.Ghislain FIEVET
Rendered fromvign04_advRandWalkMinChange.Rmd
in adverSCarial 1.3.5.Developed by Gabriel Hoffman
Rendered fromnon_lin_eff.Rmd
in dreamlet 1.3.1.Developed by Gabriel Hoffman
Rendered fromvariancePartition.Rmd
in variancePartition 1.35.4.Developed by Gabriel Hoffman
Rendered fromadditional_visualization.Rmd
in variancePartition 1.35.4.Developed by Gabriel Hoffman
Rendered fromrnd_effects.Rmd
in variancePartition 1.35.4.Kylie Ariel Bemis
Rendered fromCardinalIO-guide.Rmd
in CardinalIO 1.3.1.Developed by Gabriel Hoffman
Rendered frommashr.Rmd
in dreamlet 1.3.1.Developed by Gabriel Hoffman
Rendered fromh5ad_on_disk.Rmd
in dreamlet 1.3.1.Haakon Tjeldnes & Kornel Labun
Rendered fromWorking_with_transcripts.Rmd
in ORFik 1.25.3.Kylie Ariel Bemis
Rendered frommatter-2-guide.Rmd
in matter 2.7.2.Tobias Kockmann, Christian Panse
Rendered fromMsBackendRawFileReader.Rmd
in MsBackendRawFileReader 1.11.3.Pierre-Luc Germain
Rendered fromscATAC.Rmd
in scDblFinder 1.19.1.Aaron Lun
Rendered fromlinking.Rmd
in beachmat 2.21.3.Philippe Hauchamps, Laurent Gatto
Rendered fromDemo.Rmd
in CytoPipeline 1.5.1.Gordon Smyth
Rendered fromusersguide.Rnw
in limma 3.61.2.Gordon Smyth
Rendered fromintro.Rmd
in limma 3.61.2.Aaron Lun
Rendered fromuserguide.Rmd
in beachmat.hdf5 1.3.1.Haakon Tjeldnes & Kornel Labun
Rendered fromImporting_Data.Rmd
in ORFik 1.25.3.Devon Kohler ([email protected])
Rendered fromMSstatsShiny_Launch_Instructions.Rmd
in MSstatsShiny 1.7.2.John Lee
Rendered fromggmanh.Rmd
in ggmanh 1.9.7.Andrzej Oleś, Wolfgang Huber, Martin Morgan
Rendered fromAuthoringRmdVignettes.Rmd
in BiocStyle 2.33.1.Hani Habra
Rendered frommetabCombiner_vignette.Rmd
in metabCombiner 1.15.2.Zijian Ni and Christina Kendziorski
Rendered fromSpotClean.Rmd
in SpotClean 1.7.1.Denes Turei
Rendered frompaths.Rmd
in OmnipathR 3.13.1.Ning Liu, Dharmesh Bhuva, Ahmed Mohamed, Chin Wee Tan, Melissa Davis
Rendered fromQuick_start.Rmd
in standR 1.9.0.Haakon Tjeldnes & Kornel Labun
Rendered fromRibo-seq_pipeline.Rmd
in ORFik 1.25.3.Pascal Schlosser, Jochen Knaus
Rendered fromnetboost.Rmd
in netboost 2.13.1.Constantin Ahlmann-Eltze
Rendered frompseudobulk.Rmd
in glmGamPoi 1.17.3.Lisa M. Breckels, Laurent Gatto
Rendered fromv05-pRoloc-transfer-learning.Rmd
in pRoloc 1.45.1.Pierre-Luc Germain, Aaron Lun
Rendered fromintroduction.Rmd
in scDblFinder 1.19.1.Fabian Mueller
Rendered fromRnBeads.Rnw
in RnBeads 2.23.0.Sonali Arora, H. Khan
Rendered fromAccept-organism-for-GenomeInfoDb.Rmd
in GenomeInfoDb 1.41.1.Till Soerensen
Rendered fromimmunoClust.Rnw
in immunoClust 1.37.3.Hervé Pagès
Rendered fromTen_things_slides.Rnw
in GenomicRanges 1.57.1.Patrick Aboyoun, Beryl Kanali
Rendered fromRleTricks.Rmd
in S4Vectors 0.43.1.Yuzhou Feng
Rendered frombasic_analysis.Rmd
in SPIAT 1.7.1.Yuzhou Feng
Rendered fromtissue-structure.Rmd
in SPIAT 1.7.1.Yuzhou Feng
Rendered fromneighborhood.Rmd
in SPIAT 1.7.1.Anna Trigos, Yuzhou Feng, Tianpei Yang, Mabel Li, John Zhu, Volkan Ozcoban, Maria Doyle
Rendered fromSPIAT.Rmd
in SPIAT 1.7.1.Yuzhou Feng
Rendered fromquality-control_visualisation.Rmd
in SPIAT 1.7.1.Yuzhou Feng
Rendered fromdata_reading-formatting.Rmd
in SPIAT 1.7.1.Yuzhou Feng
Rendered fromspatial-heterogeneity.Rmd
in SPIAT 1.7.1.Dario Righelli, Helena L. Crowell, Lukas M. Weber
Rendered fromSpatialExperiment.Rmd
in SpatialExperiment 1.15.1.Dario Strbenac, Ellis Patrick<br> The University of Sydney, Australia.
Rendered fromDevelopersGuide.Rmd
in ClassifyR 3.9.2.Denes Turei
Rendered fromdb_manager.Rmd
in OmnipathR 3.13.1.Peng Liu, Colin N. Dewey, and Sündüz Keleş
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in pram 1.21.1.Rodrigo Arcoverde Cerveira
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in scifer 1.7.3.Nicole Kramer, Eric S. Davis, Craig Wenger, Sarah Parker, Erika Deoudes, Michael Love, Douglas H. Phanstiel
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in plotgardener 1.11.3.AlpsNMR authors
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in AlpsNMR 4.7.1.Lorena Pantano
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in DEGreport 1.41.1.Matthias Futschik
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in Mfuzz 2.65.0.Jiefei Wang
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in SharedObject 1.19.1.Marcel Ramos & Levi Waldron
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in MultiAssayExperiment 1.31.3.Author: Daniela Cassol ([email protected]) and Thomas Girke ([email protected])
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in systemPipeR 2.11.2.Luke Zappia, Aaron Lun
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in zellkonverter 1.15.1.Chen Meng
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in omicsViewer 1.9.2.Gavin R Lloyd, Andris Jankevics, Ralf J Weber
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in structToolbox 1.17.3.Davis McCarthy, Aaron Lun
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in scater 1.33.2.Ting Huang ([email protected]), Meena Choi ([email protected]), Mateusz Staniak ([email protected]), Sicheng Hao ([email protected]), Olga Vitek([email protected])
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in MSstatsTMT 2.13.1.Denes Turei
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in OmnipathR 3.13.1.Dania Machlab, Lukas Burger, Charlotte Soneson, Michael Stadler
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in monaLisa 1.11.1.Denes Turei, Alberto Valdeolivas, Attila Gabor, Julio Saez-Rodriguez
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in OmnipathR 3.13.1.MultiAssay Special Interest Group
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in MultiAssayExperiment 1.31.3.Habil Zare
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in Pigengene 1.31.2.Andrea Rau
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in padma 1.15.1.Aaron Lun
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in scDblFinder 1.19.1.Denes Turei, Alberto Valdeolivas, Julio Saez-Rodriguez
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in OmnipathR 3.13.1.Fabian Mueller
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in RnBeads 2.23.0.Anqi Zhu, Joseph G. Ibrahim, and Michael I. Love
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in apeglm 1.27.1.Aaron Lun
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in scDblFinder 1.19.1.Aaron Lun
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in scDblFinder 1.19.1.Jianhong Ou, Lihua Julie Zhu
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in trackViewer 1.41.3.Martin Pirkl, Madeline Diekmann, Marlies van der Wees, Niko Beerenwinkel, Holger Fröhlich, Florian Markowetz
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in epiNEM 1.29.0.Aaron Lun
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in scuttle 1.15.1.Aaron Lun
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in scuttle 1.15.1.Aaron Lun
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in BiocSingular 1.21.2.Martin Pirkl, Niko Beerenwinkel
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in mnem 1.21.0.Constantin Ahlmann-Eltze
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in glmGamPoi 1.17.3.Jiefei Wang
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in SharedObject 1.19.1.Hervé Pagès
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in GenomicRanges 1.57.1.Hervé Pagès
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in S4Vectors 0.43.1.Guangchuang Yu
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in DOSE 3.31.2.Aurelien Brionne, Amelie Juanchich, Christelle Hennequet-Antier
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in ViSEAGO 1.19.0.Aurelien Brionne, Amelie Juanchich, Christelle Hennequet-Antier
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in ViSEAGO 1.19.0.Aurelien Brionne, Amelie Juanchich, Christelle Hennequet-Antier
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in ViSEAGO 1.19.0.Aurelien Brionne, Amelie Juanchich, Christelle Hennequet-Antier
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in ViSEAGO 1.19.0.Hervé Pagès
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in GenomeInfoDb 1.41.1.Jakob Theorell
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in DepecheR 1.21.3.Constantin Ahlmann-Eltze
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in sparseMatrixStats 1.17.2.BJ Stubbs, S Gopaulakrishnan, Nitesh Truaga, Martin Morgan, Vincent Carey
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in AnVIL 1.17.6.Kévin Rue-Albrecht
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in TVTB 1.31.1.Gaëlle Lefort, Rémi Servien and Nathalie Vialaneix
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in ASICS 2.21.1.Lisa M. Breckels, Laurent Gatto
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in pRoloc 1.45.1.Benilton Carvalho
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in oligo 1.69.2.Jakob Theorell
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in DepecheR 1.21.3.Lisa M. Breckels, Laurent Gatto
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in pRoloc 1.45.1.Oliver Crook, Laurent Gatto
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in pRoloc 1.45.1.Aaron Lun
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in BiocSingular 1.21.2.Laurent Gatto
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in pRoloc 1.45.1.Hemi Luan
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in statTarget 1.35.1.Hemi Luan
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in statTarget 1.35.1.Aaron Lun
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in SummarizedExperiment 1.35.1.Leonard C. Schalkwyk
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in bigmelon 1.31.1.Kévin Rue-Albrecht
Rendered fromIntroduction.Rmd
in TVTB 1.31.1.Hervé Pagès
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in IRanges 2.39.1.Bioconductor Package
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in BiocStyle 2.33.1.Marcel Ramos
Rendered fromMultiAssayExperiment_cheatsheet.pdf.asis
in MultiAssayExperiment 1.31.3.Hervé Pagès
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in GenomicRanges 1.57.1.Leonardo Collado-Torres
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in recount 1.31.2.Mattia Chiesa, Laura Ballarini, Alessia Gerbasi, Giuseppe Albi, Arianna Dagliati, Luca Piacentini
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in PIUMA 1.1.1.Lambda Moses, Lior Pachter
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in SpatialFeatureExperiment 1.7.0.Sean Davis
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in GenomicDataCommons 1.29.3.Elisa Gómez de Lope
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in funOmics 0.99.8.Sean Davis & Martin Morgan
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in GenomicDataCommons 1.29.3.Sean Davis
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in GenomicDataCommons 1.29.3.Johannes Rainer
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in MetaboAnnotation 1.9.1.Nicolas Chanard, David Depierre, Robel A. Tesfaye, Stéphane Schaak & Olivier Cuvier
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in HicAggR 1.1.2.Lucille Lopez-Delisle
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in BREW3R.r 1.1.1.Philippe Hauchamps, Laurent Gatto
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in CytoMDS 1.1.0.Shian Su
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in NanoMethViz 3.1.5.Yunshun Chen
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in edgeR 4.3.4.Stefano Mangiola
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in tidybulk 1.17.0.Appsilon
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in shiny.gosling 1.1.0.Appsilon
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in shiny.gosling 1.1.0.Appsilon
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in shiny.gosling 1.1.0.Appsilon
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in shiny.gosling 1.1.0.Appsilon
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in shiny.gosling 1.1.0.Stefano Mangiola
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in tidySingleCellExperiment 1.15.1.Dongyuan Song, Qingyang Wang
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in scDesign3 1.3.0.Thomas N. Lawson
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in msPurity 1.31.1.Yunshun Chen
Rendered fromedgeRUsersGuide.Rnw
in edgeR 4.3.4.Guangchuang Yu School of Basic Medical Sciences, Southern Medical University
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in ChIPseeker 1.41.0.Mike Jiang
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in openCyto 2.17.1.Mike Jiang
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in openCyto 2.17.1.Dr. Xiuwen Zheng
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in HIBAG 1.41.1.Dr. Xiuwen Zheng
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in HIBAG 1.41.1.Dr. Xiuwen Zheng
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in HIBAG 1.41.1.Dania Machlab, Lukas Burger, Charlotte Soneson, Michael Stadler
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in monaLisa 1.11.1.Thomas N. Lawson
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in msPurity 1.31.1.Timothy Tickle, Itay Tirosh, Christophe Georgescu, Maxwell Brown, Brian Haas
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in infercnv 1.21.0.Mike Jiang
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in openCyto 2.17.1.| Ashish Jain, Geetu Tuteja | Bioinformatics and Computational Biology | Genetics, Development, and Cell Biology | Iowa State University, Ames, Iowa |
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in TissueEnrich 1.25.1.Thomas N. Lawson
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in msPurity 1.31.1.Parichoy Pal Choudhury
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in iCARE 1.33.1.Parichoy Pal Choudhury
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in iCARE 1.33.1.Aaron Lun
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in diffHic 1.37.3.Benilton Carvalho
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in pdInfoBuilder 1.69.3.Benilton Carvalho
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in pdInfoBuilder 1.69.3.Hervé Pagès
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in Biostrings 2.73.1.Steffen Neumann
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in Rdisop 1.65.1.