Package: webbioc 1.85.0

Colin A. Smith

webbioc: Bioconductor Web Interface

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Authors:Colin A. Smith <[email protected]>

webbioc_1.85.0.tar.gz
webbioc_1.85.0.zip(r-4.7)webbioc_1.85.0.zip(r-4.6)webbioc_1.85.0.zip(r-4.5)
webbioc_1.85.0.tgz(r-4.6-any)webbioc_1.85.0.tgz(r-4.5-any)
webbioc_1.85.0.tar.gz(r-4.7-any)webbioc_1.85.0.tar.gz(r-4.6-any)
webbioc_1.85.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
webbioc/json (API)

# Install 'webbioc' in R:
install.packages('webbioc', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:webbioc-1.85.0(bioc 3.24)webbioc-1.84.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

infrastructuremicroarrayonechanneldifferentialexpression

3.90 score 4 scripts 2 mentions 2 exports 67 dependencies

Last updated from:fde5be1231. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR181
linux-devel-x86_64NOTE244
source / vignettesOK220
linux-release-x86_64NOTE224
macos-release-arm64NOTE153
macos-oldrel-arm64NOTE120
windows-develNOTE167
windows-releaseNOTE148
windows-oldrelNOTE137
wasm-releaseOK146

Exports:installRepsmt.wrapper

Dependencies:affyaffyioannaffyAnnotationDbiaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfarverfastmapgcrmagenericsggplot2glueGO.dbgtablehttrIRangesisobandjsonliteKEGGRESTlabelinglatticelifecyclelimmamagrittrMASSMatrixmemoisemimemulttestopensslpkgconfigplyrpngpreprocessCoreqvalueR6RColorBrewerRcppreshape2rlangRSQLiteS4VectorsS7scalesSeqinfostatmodstringistringrsurvivalsysvctrsviridisLitevsnwithrXVector

webbioc Demo Script
Uploading CEL Files | Preprocessing Affymetrix Data | Differential Expression and Multiple Testing | Annotation with Biological Metadata | Searching Biological Medadata

Last update: 2013-11-01
Started: 2013-11-01

webbioc Overview
User Interface Goals | Architecture | System Requirements | Installation | Configuration

Last update: 2013-11-01
Started: 2013-11-01