{
  "_id": "6a49652e3c3572b93bf7eb38",
  "Package": "webbioc",
  "Version": "1.85.0",
  "Date": "2009-02-05",
  "Title": "Bioconductor Web Interface",
  "Author": "Colin A. Smith <colin@colinsmith.org>",
  "Maintainer": "Colin A. Smith <colin@colinsmith.org>",
  "SystemRequirements": "Unix, Perl (>= 5.6.0), Netpbm",
  "Description": "An integrated web interface for doing microarray analysis\nusing several of the Bioconductor packages. It is intended to\nbe deployed as a centralized bioinformatics resource for use by\nmany users. (Currently only Affymetrix oligonucleotide analysis\nis supported.)",
  "License": "GPL (>= 2)",
  "URL": "http://www.bioconductor.org/",
  "LazyLoad": "yes",
  "biocViews": "Infrastructure, Microarray, OneChannel,\nDifferentialExpression",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev perl zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:30:20 UTC",
  "RemoteUrl": "https://github.com/bioc/webbioc",
  "RemoteRef": "HEAD",
  "RemoteSha": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-23 06:48:01 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "webbioc_1.85.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/70afc51b0ca5ba068b4d06fb48a906d2435dc5e4d912292cfdb177476fe33a54",
  "_filesize": 281017,
  "_sha256": "70afc51b0ca5ba068b4d06fb48a906d2435dc5e4d912292cfdb177476fe33a54",
  "_expires": "2026-10-12T19:55:19.000Z",
  "_created": "2026-06-23T06:48:01.000Z",
  "_published": "2026-07-04T19:55:26.228Z",
  "_bioccheck": {
    "error": 3,
    "warning": 3,
    "note": 10
  },
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969",
  "_status": "success",
  "_upstream": "https://github.com/bioc/webbioc",
  "_commit": {
    "id": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379420
  },
  "_maintainer": {
    "name": "Colin A. Smith",
    "email": "colin@colinsmith.org",
    "login": "colinasmith",
    "description": "Protein Dynamics and Design",
    "uuid": 1170378
  },
  "_distro": "noble",
  "_jobs": [
    {
      "job": 85162274950,
      "time": 181,
      "config": "bioc-checks",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7813478820"
    },
    {
      "job": 85162274948,
      "time": 244,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7813498026"
    },
    {
      "job": 85162274578,
      "time": 224,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7813491864"
    },
    {
      "job": 85162274644,
      "time": 120,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7813460191"
    },
    {
      "job": 85162274954,
      "time": 153,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7813470457"
    },
    {
      "job": 85162274589,
      "time": 220,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813423592"
    },
    {
      "job": 85162274541,
      "time": 146,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7813467851"
    },
    {
      "job": 85162274590,
      "time": 167,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7813474710"
    },
    {
      "job": 85162274971,
      "time": 137,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7813465813"
    },
    {
      "job": 85162274765,
      "time": 148,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7813468744"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 1.8.0",
      "role": "Depends"
    },
    {
      "package": "Biobase",
      "role": "Depends"
    },
    {
      "package": "affy",
      "role": "Depends"
    },
    {
      "package": "multtest",
      "role": "Depends"
    },
    {
      "package": "annaffy",
      "role": "Depends"
    },
    {
      "package": "vsn",
      "role": "Depends"
    },
    {
      "package": "gcrma",
      "role": "Depends"
    },
    {
      "package": "qvalue",
      "role": "Depends"
    },
    {
      "package": "multtest",
      "role": "Imports"
    },
    {
      "package": "qvalue",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "BiocManager",
      "role": "Imports"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.85.0",
      "bioc": "3.24"
    },
    {
      "branch": "release",
      "version": "1.84.0",
      "bioc": "3.23"
    }
  ],
  "_topics": [
    "infrastructure",
    "microarray",
    "onechannel",
    "differentialexpression"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 441,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_mentions": 2,
  "_searchresults": 4,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/webbioc.html",
    "manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "installReps",
    "mt.wrapper"
  ],
  "_help": [
    {
      "page": "installReps",
      "title": "Install all repository packages",
      "topics": [
        "installReps"
      ]
    },
    {
      "page": "mt.wrapper",
      "title": "Multiple Testing Wrapper Function",
      "topics": [
        "mt.wrapper"
      ]
    }
  ],
  "_rundeps": [
    "affy",
    "affyio",
    "annaffy",
    "AnnotationDbi",
    "askpass",
    "Biobase",
    "BiocGenerics",
    "BiocManager",
    "Biostrings",
    "bit",
    "bit64",
    "blob",
    "cachem",
    "cli",
    "cpp11",
    "crayon",
    "curl",
    "DBI",
    "farver",
    "fastmap",
    "gcrma",
    "generics",
    "ggplot2",
    "glue",
    "GO.db",
    "gtable",
    "httr",
    "IRanges",
    "isoband",
    "jsonlite",
    "KEGGREST",
    "labeling",
    "lattice",
    "lifecycle",
    "limma",
    "magrittr",
    "MASS",
    "Matrix",
    "memoise",
    "mime",
    "multtest",
    "openssl",
    "pkgconfig",
    "plyr",
    "png",
    "preprocessCore",
    "qvalue",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "reshape2",
    "rlang",
    "RSQLite",
    "S4Vectors",
    "S7",
    "scales",
    "Seqinfo",
    "statmod",
    "stringi",
    "stringr",
    "survival",
    "sys",
    "vctrs",
    "viridisLite",
    "vsn",
    "withr",
    "XVector"
  ],
  "_vignettes": [
    {
      "source": "demoscript.Rnw",
      "filename": "demoscript.pdf",
      "title": "webbioc Demo Script",
      "engine": "utils::Sweave",
      "headings": [
        "Uploading CEL Files",
        "Preprocessing Affymetrix Data",
        "Differential Expression and Multiple Testing",
        "Annotation with Biological Metadata",
        "Searching Biological Medadata"
      ],
      "created": "2013-11-01 19:50:00",
      "modified": "2013-11-01 19:50:00",
      "commits": 1
    },
    {
      "source": "webbioc.Rnw",
      "filename": "webbioc.pdf",
      "title": "webbioc Overview",
      "engine": "utils::Sweave",
      "headings": [
        "User Interface Goals",
        "Architecture",
        "System Requirements",
        "Installation",
        "Configuration"
      ],
      "created": "2013-11-01 19:50:00",
      "modified": "2013-11-01 19:50:00",
      "commits": 1
    }
  ],
  "_score": 3.9030899869919438,
  "_indexed": true,
  "_nocasepkg": "webbioc",
  "_universes": [
    "bioc",
    "colinasmith"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.85.0",
      "date": "2026-06-23T06:51:31.000Z",
      "distro": "noble",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/a65237474fe61a10e4dbead3c75481368fd9624146674beb19c40f702e751036",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.85.0",
      "date": "2026-06-23T06:51:02.000Z",
      "distro": "noble",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/db1274eea5661401c8d8661fefd2205ea01aa97a970a4521da703cc7e6aa6691",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.85.0",
      "date": "2026-06-23T06:49:48.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/834956c5d96fa288e18bf5ba4a88ba51b10b7b7dd7d6918b5d1169b5402bffbd",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.85.0",
      "date": "2026-06-23T06:50:11.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/2e845dfe255f03a68a711da2d779e25637cea019bf65b7c6abc5da3cd92f1d46",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.85.0",
      "date": "2026-06-23T06:50:50.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/c867708b433cba02353d8f27c7947112cfd1da253b5757cfeae3d30d6bdeedbe",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.85.0",
      "date": "2026-06-23T06:49:58.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/fb7c95b01854a523d080c88525af90be37a01e335ec01642ceff7e6aef2550cb",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.85.0",
      "date": "2026-06-23T06:49:35.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/5d76181561efceecb88adc3080ff9a4f8a38be747617e0c35bd53ede90ff0e5f",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.85.0",
      "date": "2026-06-23T06:49:42.000Z",
      "commit": "fde5be1231e88cfebb32ab3e1cdd2bc76b6913cf",
      "fileid": "https://r2.ropensci.org/f021a0a5a727ebd960f2d1719946a61fdfba2eac82dda20c8ffeb024ccd38ec1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/28007626969"
    }
  ]
}