Package: spoon 1.3.3

Kinnary Shah

spoon: Address the Mean-variance Relationship in Spatial Transcriptomics Data

This package addresses the mean-variance relationship in spatially resolved transcriptomics data. Precision weights are generated for individual observations using Empirical Bayes techniques. These weights are used to rescale the data and covariates, which are then used as input in spatially variable gene detection tools.

Authors:Kinnary Shah [aut, cre], Boyi Guo [aut], Stephanie C. Hicks [aut]

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spoon_1.3.3.tgz(r-4.5-any)spoon_1.3.3.tgz(r-4.4-any)
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spoon_1.3.3.tgz(r-4.4-emscripten)
spoon.pdf |spoon.html✨
spoon/json (API)
NEWS

# Install 'spoon' in R:

install.packages('spoon', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/kinnaryshah/spoon/issues

On BioConductor:spoon-1.3.1(bioc 3.21)spoon-1.2.0(bioc 3.20)

spatial singlecell transcriptomics geneexpression preprocessing

4.76 score 19 scripts 157 downloads 2 exports 81 dependencies

Last updated 10 days agofrom:ee4814b57b. Checks:7 OK. Indexed: yes.

Target	Result	Latest binary
Doc / Vignettes	OK	Mar 20 2025
R-4.5-win	OK	Mar 20 2025
R-4.5-mac	OK	Mar 20 2025
R-4.5-linux	OK	Mar 20 2025
R-4.4-win	OK	Mar 20 2025
R-4.4-mac	OK	Mar 20 2025
R-4.4-linux	OK	Mar 20 2025