Package: matchBox 1.47.0

Luigi Marchionni

matchBox: Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.

The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.

Authors:Luigi Marchionni <[email protected]>, Anuj Gupta <[email protected]>

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matchBox.pdf |matchBox.html✨
matchBox/json (API)

# Install 'matchBox' in R:
install.packages('matchBox', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • matchBoxExpression - Example data: ranking from three differential gene expression experiments

On BioConductor:matchBox-1.47.0(bioc 3.20)matchBox-1.46.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 1.00 score 0 dependencies

Last updated 2 months agofrom:de7a7cac84

Exports:calcHypPIcomputeCatfilterRedundantmergeDataplotCat

Dependencies:

Working with the matchBox package

Rendered frommatchBox.Rnwusingutils::Sweaveon Jul 03 2024.

Last update: 2018-11-16
Started: 2012-10-01