Introduction | Preparing the Data | Correspondance at the Top Curves | Plotting the results | System Information | Literature Cited
Package: matchBox 1.55.0
Luigi Marchionni
matchBox: Utilities to compute, compare, and plot the agreement between ordered vectors of features (ie. distinct genomic experiments). The package includes Correspondence-At-the-TOP (CAT) analysis.
The matchBox package enables comparing ranked vectors of features, merging multiple datasets, removing redundant features, using CAT-plots and Venn diagrams, and computing statistical significance.
Authors:
matchBox_1.55.0.tar.gz
matchBox_1.55.0.zip(r-4.7)matchBox_1.55.0.zip(r-4.6)matchBox_1.55.0.zip(r-4.5)
matchBox_1.55.0.tgz(r-4.6-any)matchBox_1.55.0.tgz(r-4.5-any)
matchBox_1.55.0.tar.gz(r-4.7-any)matchBox_1.55.0.tar.gz(r-4.6-any)
matchBox_1.55.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
matchBox/json (API)
| # Install 'matchBox' in R: |
| install.packages('matchBox', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- matchBoxExpression - Example data: ranking from three differential gene expression experiments
On BioConductor:matchBox-1.55.0(bioc 3.24)matchBox-1.54.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
softwareannotationmicroarraymultiplecomparisonvisualization
Last updated from:61e70f2328. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 139 | ||
| linux-devel-x86_64 | NOTE | 121 | ||
| source / vignettes | OK | 123 | ||
| linux-release-x86_64 | NOTE | 119 | ||
| macos-release-arm64 | NOTE | 74 | ||
| macos-oldrel-arm64 | NOTE | 63 | ||
| windows-devel | NOTE | 68 | ||
| windows-release | NOTE | 56 | ||
| windows-oldrel | NOTE | 57 | ||
| wasm-release | OK | 86 |
Exports:calcHypPIcomputeCatfilterRedundantmergeDataplotCat
Dependencies:
