Package: GRmetrics 1.33.0
GRmetrics: Calculate growth-rate inhibition (GR) metrics
Functions for calculating and visualizing growth-rate inhibition (GR) metrics.
Authors:
GRmetrics_1.33.0.tar.gz
GRmetrics_1.33.0.zip(r-4.5)GRmetrics_1.33.0.zip(r-4.4)GRmetrics_1.33.0.zip(r-4.3)
GRmetrics_1.33.0.tgz(r-4.4-any)GRmetrics_1.33.0.tgz(r-4.3-any)
GRmetrics_1.33.0.tar.gz(r-4.5-noble)GRmetrics_1.33.0.tar.gz(r-4.4-noble)
GRmetrics_1.33.0.tgz(r-4.4-emscripten)GRmetrics_1.33.0.tgz(r-4.3-emscripten)
GRmetrics.pdf |GRmetrics.html✨
GRmetrics/json (API)
NEWS
# Install 'GRmetrics' in R: |
install.packages('GRmetrics', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/uc-bd2k/grmetrics/issues
- inputCaseA - Simulated dose-response assay data
- inputCaseC - Simulated dose-response assay data
On BioConductor:GRmetrics-1.31.0(bioc 3.20)GRmetrics-1.30.0(bioc 3.19)
immunooncologycellbasedassayscellbiologysoftwaretimecoursevisualization
Last updated 23 days agofrom:cdb20a07e1. Checks:OK: 1 NOTE: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 30 2024 |
R-4.5-win | NOTE | Oct 30 2024 |
R-4.5-linux | NOTE | Oct 30 2024 |
R-4.4-win | NOTE | Oct 30 2024 |
R-4.4-mac | NOTE | Oct 31 2024 |
R-4.3-win | NOTE | Oct 31 2024 |
R-4.3-mac | NOTE | Oct 31 2024 |
Exports:GRboxGRdrawDRCGRfitGRgetDefsGRgetGroupVarsGRgetMetricsGRgetValuesGRscatter
Dependencies:abindaskpassbackportsbase64encBiobaseBiocGenericsbootbroombslibcachemcarcarDataclicodetoolscolorspacecowplotcpp11crayoncrosstalkcurldata.tableDelayedArrayDerivdigestdoBydplyrdrcevaluatefansifarverfastmapfontawesomeFormulafsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesggplot2gluegtablegtoolshighrhtmltoolshtmlwidgetshttrIRangesisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclelme4magrittrMASSMatrixMatrixGenericsMatrixModelsmatrixStatsmemoisemgcvmicrobenchmarkmimeminqamodelrmultcompmunsellmvtnormnlmenloptrnnetnumDerivopensslpbkrtestpillarpkgconfigplotlyplotrixpromisespurrrquantregR6rappdirsRColorBrewerRcppRcppEigenrlangrmarkdownS4ArraysS4VectorssandwichsassscalesSparseArraySparseMstringistringrSummarizedExperimentsurvivalsysTH.datatibbletidyrtidyselecttinytexUCSC.utilsutf8vctrsviridisLitewithrxfunXVectoryamlzlibbioczoo
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Boxplots of a given GR metric | GRbox |
Dose-Response Curves | GRdrawDRC |
Extract GR parameters from a dataset | GRfit |
GR metrics definitions | GRgetDefs |
Grouping Variables | GRgetGroupVars |
GR metrics | GRgetMetrics |
GR values | GRgetValues |
Scatterplot of a given GR metric | GRscatter |
Simulated dose-response assay data (Case A) | inputCaseA |
Simulated dose-response assay data (Case C) | inputCaseC |