Package: GENIE3 1.27.0

Van Anh Huynh-Thu

GENIE3: GEne Network Inference with Ensemble of trees

This package implements the GENIE3 algorithm for inferring gene regulatory networks from expression data.

Authors:Van Anh Huynh-Thu, Sara Aibar, Pierre Geurts

GENIE3_1.27.0.tar.gz
GENIE3_1.27.0.zip(r-4.5)GENIE3_1.27.0.zip(r-4.4)GENIE3_1.27.0.zip(r-4.3)
GENIE3_1.27.0.tgz(r-4.4-arm64)GENIE3_1.27.0.tgz(r-4.4-x86_64)GENIE3_1.27.0.tgz(r-4.3-arm64)GENIE3_1.27.0.tgz(r-4.3-x86_64)
GENIE3_1.27.0.tar.gz(r-4.5-noble)GENIE3_1.27.0.tar.gz(r-4.4-noble)
GENIE3_1.27.0.tgz(r-4.4-emscripten)GENIE3_1.27.0.tgz(r-4.3-emscripten)
GENIE3.pdf |GENIE3.html
GENIE3/json (API)
NEWS

# Install 'GENIE3' in R:
install.packages('GENIE3', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:GENIE3-1.27.0(bioc 3.20)GENIE3-1.26.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

2 exports 6.30 score 21 dependencies 4 dependents 172 mentions

Last updated 2 months agofrom:a693965663

Exports:GENIE3getLinkList

Dependencies:clidplyrfansigenericsgluelifecyclemagrittrpillarpkgconfigplyrR6Rcppreshape2rlangstringistringrtibbletidyselectutf8vctrswithr

GENIE3 vignette

Rendered fromGENIE3.Rmdusingknitr::rmarkdownon Jul 02 2024.

Last update: 2023-08-16
Started: 2016-11-04

Readme and manuals

Help Manual

Help pageTopics
GENIE3GENIE3 GENIE3,ExpressionSet-method GENIE3,matrix-method GENIE3,SummarizedExperiment-method
getLinkListgetLinkList