NEWS

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GENIE3 1.13.3

• The regulators can now be provided as a list with different regulators for each gene/feature.

GENIE3 1.5.2

• Adding check for duplicated rownames (gene id/names)
• Bugfix in getLinkList: diag <- NA

GENIE3 0.99.7

• Solved error for not found "%dopar%"

GENIE3 0.99.4

• Removed argument "seed", use set.seed instead Minor improvemtents

GENIE3 0.99.2

INTERFACE CHANGES

• Functions and parameters renamed to CamelCase rather than containing dots (e.g. get.link.list into getLinkList)

NEW FEATURES

• GENIE3 now accepts ExpressionSet, SummarizedExperiment and SCESet as input