Package: xmapbridge 1.71.0

Chris Wirth

xmapbridge: Export plotting files to the xmapBridge for visualisation in X:Map

xmapBridge can plot graphs in the X:Map genome browser. This package exports plotting files in a suitable format.

Authors:Tim Yates <[email protected]> and Crispin J Miller <[email protected]>

xmapbridge_1.71.0.tar.gz
xmapbridge_1.71.0.zip(r-4.7)xmapbridge_1.71.0.zip(r-4.6)xmapbridge_1.71.0.zip(r-4.5)
xmapbridge_1.71.0.tgz(r-4.6-any)xmapbridge_1.71.0.tgz(r-4.5-any)
xmapbridge_1.71.0.tar.gz(r-4.7-any)xmapbridge_1.71.0.tar.gz(r-4.6-any)
xmapbridge_1.71.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
xmapbridge/json (API)

# Install 'xmapbridge' in R:
install.packages('xmapbridge', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Datasets:

On BioConductor:xmapbridge-1.71.0(bioc 3.24)xmapbridge-1.70.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

annotationreportwritingvisualization

3.30 score 3 scripts 498 downloads 1 mentions 19 exports 0 dependencies

Last updated from:7748fb96c7. Checks:1 FAILURE, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksFAILURE124
linux-devel-x86_64NOTE107
source / vignettesOK154
linux-release-x86_64NOTE166
macos-release-arm64NOTE110
macos-oldrel-arm64NOTE99
windows-develNOTE83
windows-releaseNOTE87
windows-oldrelNOTE73
wasm-releaseOK82

Exports:xmap.colxmap.debugxmap.graph.deletexmap.graph.listxmap.graph.loadxmap.graph.newxmap.graph.savexmap.plotxmap.plot.deletexmap.plot.listxmap.plot.loadxmap.plot.newxmap.plot.savexmap.pointsxmap.project.deletexmap.project.listxmap.project.loadxmap.project.newxmap.project.save

Dependencies:

xmapbridge primer

Rendered fromxmapbridge.Rnwusingutils::Sweaveon May 29 2026.

Last update: 2019-12-23
Started: 2013-11-01

Readme and manuals

Help Manual

Help pageTopics
Export plotting files to the xmapBridge for visualisation in X:Mapxmapbridge-package xmapbridge
Sample exon array datasetexon.data
Generate a colour integer for the xmapBridgexmap.col
Underlying xmap methods for manipulating projects, graphs, and plots!=,Graph,Graph-method !=,Plot,Plot-method !=,Project,Project-method ==,Graph,Graph-method ==,Plot,Plot-method ==,Project,Project-method as.character,Graph-method as.character,Plot-method as.character,Project-method xmap.debug xmap.graph.delete xmap.graph.list xmap.graph.load xmap.graph.new xmap.graph.save xmap.plot.delete xmap.plot.list xmap.plot.load xmap.plot.new xmap.plot.save xmap.project.delete xmap.project.list xmap.project.load xmap.project.new xmap.project.save
Utility methods for quick graph generationxmap.plot xmap.points