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Package: scanMiRData 1.19.0
Pierre-Luc Germain
scanMiRData: miRNA Affinity models for the scanMiR package
This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.
Authors:
scanMiRData_1.19.0.tar.gz
scanMiRData_1.19.0.tar.gz(r-4.7-any)scanMiRData_1.19.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
scanMiRData/json (API)
| # Install 'scanMiRData' in R: |
| install.packages('scanMiRData', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
On BioConductor:scanMiRData-1.19.0(data/experiment 3.24)scanMiRData-1.18.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
mirnadataexperimentdatahomo_sapiens_datamus_musculus_datarattus_norvegicus_datadatapkg
Last updated from:6a5e47ea3e. Checks:1 ERROR, 3 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 133 | ||
| linux-devel | OK | 269 | ||
| source / vignettes | OK | 282 | ||
| linux-release | OK | 270 |
Exports:getKdModels
Dependencies:BHBiocGenericsBiocParallelBiostringsclicodetoolscowplotcpp11crayondata.tablefarverformatRfutile.loggerfutile.optionsgenericsGenomicRangesggplot2gluegtableIRangesisobandlabelinglambda.rlifecyclepwalignR6RColorBrewerrlangS4VectorsS7scalesscanMiRSeqinfoseqLogosnowstringivctrsviridisLitewithrXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| getKdModels | getKdModels |
| KdModelList for human miRNAs | hsa KdModels-hsa KdModels-hsa, |
| KdModelList for mouse miRNAs | KdModels-mmu KdModels-mmu, mmu |
| KdModelList for rat miRNAs | KdModels-rno KdModels-rno, rno |