Package: sampleClassifier 1.29.0

Khadija El Amrani

sampleClassifier: Sample Classifier

The package is designed to classify microarray RNA-seq gene expression profiles.

Authors:Khadija El Amrani [aut, cre]

sampleClassifier_1.29.0.tar.gz
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sampleClassifier.pdf |sampleClassifier.html
sampleClassifier/json (API)
NEWS

# Install 'sampleClassifier' in R:
install.packages('sampleClassifier', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:sampleClassifier-1.29.0(bioc 3.20)sampleClassifier-1.28.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

5 exports 1.08 score 85 dependencies

Last updated 2 months agofrom:ad2e404aca

Exports:classifyProfileclassifyProfile.rnaseqclassifyProfile.rnaseq.svmclassifyProfile.svmget.heatmap

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocFileCacheBiocGenericsbiomaRtBiostringsbitbit64blobcachemclassclicolorspacecpp11crayoncurlDBIdbplyrdigestdplyre1071fansifarverfastmapfilelockgenericsGenomeInfoDbGenomeInfoDbDataggplot2gluegtablehmshttrhttr2IRangesisobandjsonliteKEGGRESTlabelinglatticelifecyclemagrittrMASSMatrixmemoisemgcvMGFMMGFRmimemunsellnlmeopensslpillarpkgconfigplogrpngprettyunitsprogressproxypurrrR6rappdirsRColorBrewerrlangRSQLiteS4VectorsscalesstringistringrsystibbletidyrtidyselectUCSC.utilsutf8vctrsviridisLitewithrXMLxml2xtableXVectorzlibbioc

sampleClassifier Vignette

Rendered fromsampleClassifier.Rnwusingutils::Sweaveon Jun 30 2024.

Last update: 2018-08-30
Started: 2017-01-24

Readme and manuals

Help Manual

Help pageTopics
Sample ClassifiersampleClassifier-package sampleClassifier
Expression profile classificationclassifyProfile
Expression profile classificationclassifyProfile.rnaseq
Expression profile classificationclassifyProfile.rnaseq.svm
Expression profile classificationclassifyProfile.svm
display classification results as heatmapget.heatmap