{ "_id": "6a1aee4c1d7bb097a09f5825", "Package": "sampleClassifier", "Type": "Package", "Title": "Sample Classifier", "Version": "1.37.0", "Authors@R": "person(\"Khadija\", \"El Amrani\", role=c(\"aut\", \"cre\"), \nemail = \"a.khadija@gmx.de\")", "Description": "The package is designed to classify microarray RNA-seq\ngene expression profiles.", "biocViews": "ImmunoOncology, Classification, Microarray, RNASeq,\nGeneExpression", "License": "Artistic-2.0", "NeedsCompilation": "no", "Config/pak/sysreqs": "libicu-dev libpng-dev libxml2-dev libssl-dev\nzlib1g-dev", "Repository": "https://bioc.r-universe.dev", "Date/Publication": "2026-04-28 12:54:47 UTC", "RemoteUrl": "https://github.com/bioc/sampleClassifier", "RemoteRef": "HEAD", "RemoteSha": "8981a56154770f74ce7783940b4d9e14a46cce95", "Packaged": { "Date": "2026-05-30 09:41:27 UTC", "User": "root" }, "Author": "Khadija El Amrani [aut, cre]", "Maintainer": "Khadija El Amrani ", "MD5sum": "ab230adf90a49f22bc9ce754afc49d70", "_user": "bioc", "_type": "src", "_file": "sampleClassifier_1.37.0.tar.gz", "_fileid": "2644c2afc25203c91decb6221b214f748b4eeb25be917b0f3b8850f9f84ed85c", "_filesize": 337728, "_sha256": "2644c2afc25203c91decb6221b214f748b4eeb25be917b0f3b8850f9f84ed85c", "_created": "2026-05-30T09:41:27.000Z", "_published": "2026-05-30T14:03:56.418Z", "_jobs": [ { "job": 78640331773, "time": 213, "config": "bioc-checks", "r": "4.6.0", "check": "ERROR", "artifact": "7307400625" }, { "job": 78640331781, "time": 406, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7307417869" }, { "job": 78640331778, "time": 332, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7307411150" }, { "job": 78640331787, "time": 205, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7308721489" }, { "job": 78640331775, "time": 223, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7308670428" }, { "job": 78639576683, "time": 389, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7307255636" }, { "job": 78640331766, "time": 177, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7307397350" }, { "job": 78640331784, "time": 458, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7307420338" }, { "job": 78640331809, "time": 376, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7307412904" }, { "job": 78640331799, "time": 444, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7307418272" } ], "_bioccheck": { "error": 2, "warning": 3, "note": 14 }, "_buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/bioc/sampleClassifier", "_commit": { "id": "8981a56154770f74ce7783940b4d9e14a46cce95", "author": "A Wokaty ", "committer": "A Wokaty ", "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n", "time": 1777380887 }, "_maintainer": { "name": "Khadija El Amrani", "email": "a.khadija@gmx.de" }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.0", "role": "Depends" }, { "package": "MGFM", "role": "Depends" }, { "package": "MGFR", "role": "Depends" }, { "package": "annotate", "role": "Depends" }, { "package": "e1071", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "sampleClassifierData", "role": "Suggests" }, { "package": "BiocStyle", "role": "Suggests" }, { "package": "hgu133a.db", "role": "Suggests" }, { "package": "hgu133plus2.db", "role": "Suggests" } ], "_owner": "bioc", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-44", "n": 2 }, { "week": "2026-18", "n": 2 } ], "_tags": [], "_bioc": [ { "branch": "devel", "version": "1.37.0", "bioc": "3.24" }, { "branch": "release", "version": "1.36.0", "bioc": "3.23" } ], "_topics": [ "immunooncology", "classification", "microarray", "rnaseq", "geneexpression" ], "_userbio": { "uuid": 2286807, "type": "organization", "name": "Bioconductor", "description": "Software for the analysis and comprehension of high-throughput genomic data" }, "_downloads": { "count": 346, "source": "https://www.bioconductor.org/packages/stats/bioc/sampleClassifier" }, "_searchresults": 3, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/sampleClassifier.html", "manual.pdf" ], "_realowner": "bioc", "_cranurl": false, "_exports": [ "classifyProfile", "classifyProfile.rnaseq", "classifyProfile.rnaseq.svm", "classifyProfile.svm", "get.heatmap" ], "_help": [ { "page": "sampleClassifier-package", "title": "Sample Classifier", "topics": [ "sampleClassifier-package", "sampleClassifier" ] }, { "page": "classifyProfile", "title": "Expression profile classification", "topics": [ "classifyProfile" ] }, { "page": "classifyProfile.rnaseq", "title": "Expression profile classification", "topics": [ "classifyProfile.rnaseq" ] }, { "page": "classifyProfile.rnaseq.svm", "title": "Expression profile classification", "topics": [ "classifyProfile.rnaseq.svm" ] }, { "page": "classifyProfile.svm", "title": "Expression profile classification", "topics": [ "classifyProfile.svm" ] }, { "page": "get.heatmap", "title": "display classification results as heatmap", "topics": [ "get.heatmap" ] } ], "_rundeps": [ "annotate", "AnnotationDbi", "askpass", "Biobase", "BiocFileCache", "BiocGenerics", "biomaRt", "Biostrings", "bit", "bit64", "blob", "cachem", "class", "cli", "cpp11", "crayon", "curl", "DBI", "dbplyr", "dplyr", "e1071", "farver", "fastmap", "filelock", "generics", "ggplot2", "glue", "gtable", "hms", "httr", "httr2", "IRanges", "isoband", "jsonlite", "KEGGREST", "labeling", "lifecycle", "magrittr", "MASS", "memoise", "MGFM", "MGFR", "mime", "openssl", "pillar", "pkgconfig", "png", "prettyunits", "progress", "proxy", "purrr", "R6", "rappdirs", "RColorBrewer", "rlang", "RSQLite", "S4Vectors", "S7", "scales", "Seqinfo", "stringi", "stringr", "sys", "tibble", "tidyr", "tidyselect", "utf8", "vctrs", "viridisLite", "withr", "XML", "xml2", "xtable", "XVector" ], "_vignettes": [ { "source": "sampleClassifier.Rnw", "filename": "sampleClassifier.pdf", "title": "sampleClassifier Vignette", "engine": "utils::Sweave", "headings": [], "created": "2017-01-24 23:09:29", "modified": "2018-08-30 17:55:50", "commits": 4 } ], "_score": 3.3010299956639813, "_indexed": true, "_nocasepkg": "sampleclassifier", "_universes": [ "bioc" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.37.0", "date": "2026-05-30T10:07:15.000Z", "distro": "noble", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "b70ace517b5c33ac01374a6ecf6c063a8e658f2f92d3152de4d0f48c5b58cf92", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.6.0", "os": "linux", "version": "1.37.0", "date": "2026-05-30T10:06:12.000Z", "distro": "noble", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "8a0667523644cd912db28d84d4e5a9efc4f5f1a39858b2d531a9c5cf301d73c5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.5.3", "os": "mac", "version": "1.37.0", "date": "2026-05-30T14:01:53.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "de89b90961f0ed40293a97e5c9b34f81101eb1902c9fd8c8b15aa626632c3114", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.6.0", "os": "mac", "version": "1.37.0", "date": "2026-05-30T13:52:48.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "ace51383148083726bbe718a8e06d2d1d3238e1bd815dee17d3f9f4059c623eb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.6.0", "os": "wasm", "version": "1.37.0", "date": "2026-05-30T10:06:15.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "5247ab3945db9720051a0628554a84840dbfd0016c3df270aaf9a65691182544", "status": "success", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.7.0", "os": "win", "version": "1.37.0", "date": "2026-05-30T10:06:43.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "0e6310cf61c27540f63d7a3daa8002d76cf3cf2f2cd24695c43ca8aadbde611f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.5.3", "os": "win", "version": "1.37.0", "date": "2026-05-30T10:06:05.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "b36620fbb6edf5f2668521e13f003060180ff35437d797456b646bd5ff875037", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" }, { "r": "4.6.0", "os": "win", "version": "1.37.0", "date": "2026-05-30T10:07:16.000Z", "commit": "8981a56154770f74ce7783940b4d9e14a46cce95", "fileid": "5b9abd99170c784ff403707ea5abf8dbf9796ae17e38341236378100eca10d85", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/bioc/actions/runs/26676204217" } ] }