Package: rrvgo 1.17.0

Sergi Sayols

rrvgo: Reduce + Visualize GO

Reduce and visualize lists of Gene Ontology terms by identifying redudance based on semantic similarity.

Authors:Sergi Sayols [aut, cre], Sara Elmeligy [ctb]

rrvgo_1.17.0.tar.gz
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rrvgo.pdf |rrvgo.html
rrvgo/json (API)
NEWS

# Install 'rrvgo' in R:
install.packages('rrvgo', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/ssayols/rrvgo/issues

On BioConductor:rrvgo-1.17.0(bioc 3.20)rrvgo-1.16.0(bioc 3.19)

bioconductor-package

7 exports 1.31 score 98 dependencies 1 dependents 2 mentions

Last updated 2 months agofrom:4facf4b1d5

Exports:calculateSimMatrixheatmapPlotreduceSimMatrixscatterPlotshiny_rrvgotreemapPlotwordcloudPlot

Dependencies:AnnotationDbiaskpassbase64encBHBiobaseBiocGenericsBiostringsbitbit64blobbslibcachemclicolorspacecommonmarkcpp11crayoncurldata.tableDBIdigestfansifarverfastmapfontawesomefsGenomeInfoDbGenomeInfoDbDataggplot2ggrepelglueGO.dbGOSemSimgridBasegtableherehtmltoolshttpuvhttrigraphIRangesisobandjquerylibjsonliteKEGGRESTlabelinglaterlatticelifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeNLPopensslpheatmappillarpkgconfigplogrpngpromisesR6rappdirsRColorBrewerRcppRcppEigenRcppTOMLreticulaterlangrprojrootRSpectraRSQLiteS4VectorssassscalesshinyslamsourcetoolssystibbletmtreemapUCSC.utilsumaputf8vctrsviridisLitewithrwordcloudxml2xtableXVectoryulab.utilszlibbioc

Using the rrvgo package

Rendered fromrrvgo.Rmdusingknitr::rmarkdownon Jun 30 2024.

Last update: 2023-10-17
Started: 2020-02-27