Package: rTRMui 1.51.0

Diego Diez

rTRMui: A shiny user interface for rTRM

This package provides a web interface to compute transcriptional regulatory modules with rTRM.

Authors:Diego Diez

rTRMui_1.51.0.tar.gz
rTRMui_1.51.0.zip(r-4.7)rTRMui_1.51.0.zip(r-4.6)rTRMui_1.51.0.zip(r-4.5)
rTRMui_1.51.0.tgz(r-4.6-any)rTRMui_1.51.0.tgz(r-4.5-any)
rTRMui_1.51.0.tar.gz(r-4.7-any)rTRMui_1.51.0.tar.gz(r-4.6-any)
rTRMui_1.51.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
rTRMui/json (API)
NEWS

# Install 'rTRMui' in R:
install.packages('rTRMui', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ddiez/rtrmui/issues

On BioConductor:rTRMui-1.51.0(bioc 3.24)rTRMui-1.50.0(bioc 3.23)

transcriptionnetworkgeneregulationgraphandnetworkgui

3.30 score 1 stars 1 scripts 403 downloads 1 exports 93 dependencies

Last updated from:9ceefbf505. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR284
linux-devel-x86_64OK466
source / vignettesOK344
linux-release-x86_64OK493
macos-release-arm64OK397
macos-oldrel-arm64OK227
windows-develOK372
windows-releaseOK376
windows-oldrelOK384
wasm-releaseOK187

Exports:runTRM

Dependencies:abindAnnotationDbiaskpassbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbslibcachemcigarilloclicodetoolscommonmarkcpp11crayoncurldata.tableDBIDelayedArraydigestfastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomicAlignmentsGenomicRangesgluehtmltoolshttpuvhttrigraphIRangesjquerylibjsonliteKEGGRESTlambda.rlaterlatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeMotifDbopensslorg.Hs.eg.dborg.Mm.eg.dbotelpkgconfigpngpromisesR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangRsamtoolsRSQLitertracklayerrTRMS4ArraysS4VectorssassSeqinfoshinysnowsourcetoolsSparseArraysplitstackshapeSummarizedExperimentsysvctrswithrXMLxtableXVectoryaml

Introduction to rTRMui

Rendered fromrTRMui.Rnwusingutils::Sweaveon May 30 2026.

Last update: 2013-10-23
Started: 2013-10-18