Package: rTRMui 1.51.0
Diego Diez
rTRMui: A shiny user interface for rTRM
This package provides a web interface to compute transcriptional regulatory modules with rTRM.
Authors:
rTRMui_1.51.0.tar.gz
rTRMui_1.51.0.zip(r-4.7-any)rTRMui_1.51.0.zip(r-4.6-any)rTRMui_1.51.0.zip(r-4.5-any)
rTRMui_1.51.0.tgz(r-4.6-any)rTRMui_1.51.0.tgz(r-4.5-any)
rTRMui_1.51.0.tar.gz(r-4.7-any)rTRMui_1.51.0.tar.gz(r-4.6-any)
rTRMui_1.51.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
rTRMui/json (API)
| # Install 'rTRMui' in R: |
| install.packages('rTRMui', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/ddiez/rtrmui/issues
On BioConductor:rTRMui-1.51.0(bioc 3.24)rTRMui-1.50.0(bioc 3.23)
transcriptionnetworkgeneregulationgraphandnetworkgui
Last updated from:9ceefbf505. Checks:1 ERROR, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 211 | ||
| linux-devel | OK | 426 | ||
| source / vignettes | OK | 293 | ||
| linux-release | OK | 447 | ||
| macos-release | OK | 245 | ||
| macos-oldrel | OK | 208 | ||
| windows-devel | OK | 300 | ||
| windows-release | OK | 286 | ||
| windows-oldrel | OK | 304 | ||
| wasm-release | OK | 173 |
Exports:runTRM
Dependencies:AnnotationDbiaskpassbase64encBHBiobaseBiocBaseUtilsBiocGenericsBiocIOBiocParallelBiostringsbitbit64bitopsblobbslibcachemcigarilloclicodetoolscommonmarkcpp11crayoncurldata.tableDBIdigestfastmapfontawesomeformatRfsfutile.loggerfutile.optionsgenericsGenomicAlignmentsGenomicRangesgluehtmltoolshttpuvhttrigraphIRangesjquerylibjsonliteKEGGRESTlambda.rlaterlatticelifecyclemagrittrMatrixmemoisemimeMotifDbopensslorg.Hs.eg.dborg.Mm.eg.dbotelpkgconfigpngpromisesR6rappdirsRcppRCurlrestfulrRhtslibrjsonrlangRsamtoolsRSQLitertracklayerrTRMS4VectorssassSeqinfoshinysnowsourcetoolssplitstackshapesysvctrswithrXMLxtableXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| rTRM shiny UI | rTRMui-package rTRMui |
| Runs an rTRM (shiny) web server. | runTRM |