Package: pvac 1.61.0

Jun Lu

pvac: PCA-based gene filtering for Affymetrix arrays

The package contains the function for filtering genes by the proportion of variation accounted for by the first principal component (PVAC).

Authors:Jun Lu and Pierre R. Bushel

pvac_1.61.0.tar.gz
pvac_1.61.0.zip(r-4.7)pvac_1.61.0.zip(r-4.6)pvac_1.61.0.zip(r-4.5)
pvac_1.61.0.tgz(r-4.6-any)pvac_1.61.0.tgz(r-4.5-any)
pvac_1.61.0.tar.gz(r-4.7-any)pvac_1.61.0.tar.gz(r-4.6-any)
pvac_1.61.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
pvac/json (API)

# Install 'pvac' in R:
install.packages('pvac', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:pvac-1.61.0(bioc 3.24)pvac-1.60.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarrayonechannelqualitycontrol

3.30 score 2 scripts 1 mentions 1 exports 7 dependencies

Last updated from:4fb0a70e0d. Checks:3 ERROR, 5 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR207
linux-devel-x86_64NOTE222
source / vignettesOK314
linux-release-x86_64NOTE224
macos-release-arm64NOTE232
macos-oldrel-arm64ERROR1916
windows-develNOTE238
windows-releaseNOTE226
windows-oldrelERROR406
wasm-releaseOK116

Exports:pvacFilter

Dependencies:affyaffyioBiobaseBiocGenericsBiocManagergenericspreprocessCore

PCA-based gene filtering for Affymetrix GeneChips

Rendered frompvac.Rnwusingutils::Sweaveon Jun 16 2026.

Last update: 2018-09-07
Started: 2013-11-01