Package: plotGrouper 1.25.0

John D. Gagnon

plotGrouper: Shiny app GUI wrapper for ggplot with built-in statistical analysis

A shiny app-based GUI wrapper for ggplot with built-in statistical analysis. Import data from file and use dropdown menus and checkboxes to specify the plotting variables, graph type, and look of your plots. Once created, plots can be saved independently or stored in a report that can be saved as a pdf. If new data are added to the file, the report can be refreshed to include new data. Statistical tests can be selected and added to the graphs. Analysis of flow cytometry data is especially integrated with plotGrouper. Count data can be transformed to return the absolute number of cells in a sample (this feature requires inclusion of the number of beads per sample and information about any dilution performed).

Authors:John D. Gagnon [aut, cre]

plotGrouper_1.25.0.tar.gz
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plotGrouper.pdf |plotGrouper.html
plotGrouper/json (API)
NEWS

# Install 'plotGrouper' in R:
install.packages('plotGrouper', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/jdgagnon/plotgrouper/issues

On BioConductor:plotGrouper-1.25.0(bioc 3.21)plotGrouper-1.24.0(bioc 3.20)

immunooncologyflowcytometrygraphandnetworkstatisticalmethoddataimportguimultiplecomparisonbioconductorggplot2plottingshiny

4.78 score 6 stars 10 scripts 171 downloads 1 mentions 6 exports 127 dependencies

Last updated 4 months agofrom:6987e2a3fb. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 26 2025
R-4.5-winNOTEJan 26 2025
R-4.5-macNOTEJan 26 2025
R-4.5-linuxNOTEJan 26 2025
R-4.4-winNOTEJan 26 2025
R-4.4-macNOTEJan 26 2025
R-4.3-winNOTEJan 26 2025
R-4.3-macNOTEJan 26 2025

Exports:%>%gplotorganizeDataplotGrouperreadDatareadData_example

Dependencies:abindbackportsbase64encbitbit64bootbroombslibcachemcarcarDatacellrangercheckmateclicliprclustercolorspacecolourpickercommonmarkcorrplotcowplotcpp11crayondata.tableDerivdigestdoBydplyreggevaluatefansifarverfastmapfontawesomeforeignFormulafsgenericsggplot2ggpubrggrepelggsciggsignifgluegridExtragtablehighrHmischmshtmlTablehtmltoolshtmlwidgetshttpuvisobandjquerylibjsonliteknitrlabelinglaterlatticelifecyclelme4magrittrMASSMatrixMatrixModelsmemoisemgcvmicrobenchmarkmimeminiUIminqamodelrmunsellnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpolynomprettyunitsprogresspromisespurrrquantregR6rappdirsrbibutilsRColorBrewerRcppRcppEigenRdpackreadrreadxlreformulasrematchrlangrmarkdownrpartrstatixrstudioapisassscalesshinyshinyjsshinythemessourcetoolsSparseMstringistringrsurvivaltibbletidyrtidyselecttinytextzdbutf8vctrsviridisviridisLitevroomwithrxfunxtableyaml

plotGrouper

Rendered fromplotGrouper-vignette.Rmdusingknitr::knitron Jan 26 2025.

Last update: 2018-09-15
Started: 2018-08-24