Package: nethet 1.45.0
nethet: A bioconductor package for high-dimensional exploration of biological network heterogeneity
Package nethet is an implementation of statistical solid methodology enabling the analysis of network heterogeneity from high-dimensional data. It combines several implementations of recent statistical innovations useful for estimation and comparison of networks in a heterogeneous, high-dimensional setting. In particular, we provide code for formal two-sample testing in Gaussian graphical models (differential network and GGM-GSA; Stadler and Mukherjee, 2013, 2014) and make a novel network-based clustering algorithm available (mixed graphical lasso, Stadler and Mukherjee, 2013).
Authors:
nethet_1.45.0.tar.gz
nethet_1.45.0.zip(r-4.7)nethet_1.45.0.zip(r-4.6)nethet_1.45.0.zip(r-4.5)
nethet_1.45.0.tgz(r-4.6-x86_64)nethet_1.45.0.tgz(r-4.6-arm64)nethet_1.45.0.tgz(r-4.5-x86_64)nethet_1.45.0.tgz(r-4.5-arm64)
nethet_1.45.0.tar.gz(r-4.7-arm64)nethet_1.45.0.tar.gz(r-4.7-x86_64)nethet_1.45.0.tar.gz(r-4.6-arm64)nethet_1.45.0.tar.gz(r-4.6-x86_64)
nethet_1.45.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
nethet/json (API)
NEWS
| # Install 'nethet' in R: |
| install.packages('nethet', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:nethet-1.45.0(bioc 3.24)nethet-1.44.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:b4bb182d23. Checks:1 ERROR, 11 WARNING, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 180 | ||
| linux-devel-arm64 | WARNING | 212 | ||
| linux-devel-x86_64 | WARNING | 258 | ||
| source / vignettes | OK | 284 | ||
| linux-release-arm64 | WARNING | 212 | ||
| linux-release-x86_64 | WARNING | 283 | ||
| macos-release-arm64 | WARNING | 182 | ||
| macos-release-x86_64 | WARNING | 295 | ||
| macos-oldrel-arm64 | WARNING | 160 | ||
| macos-oldrel-x86_64 | WARNING | 398 | ||
| windows-devel | WARNING | 202 | ||
| windows-release | WARNING | 179 | ||
| windows-oldrel | WARNING | 196 | ||
| wasm-release | OK | 131 |
Exports:aggpvalbwprun_mixglassodiffnet_multisplitdiffnet_singlesplitdiffregr_multisplitdiffregr_singlesplitdot_plotexport_networkgenerate_2networksgenerate_inv_covggmgsa_multisplitgsea.irizhet_cv_glassoinvcov2parcorinvcov2parcor_arraylogratiomixglassoplot_2networksscatter_plotscreen_aic.glassoscreen_bic.glassoscreen_cv.glassoscreen_cv1se.lassoscreen_cvfix.lassoscreen_cvmin.lassoscreen_cvsqrt.lassoscreen_cvtrunc.lassosim_mixsim_mix_networks
Dependencies:BiobaseBiocGenericsBiocManagerclicodacodetoolsCompQuadFormcorpcorcpp11DBIfarverfdrtoolforeachGeneNetgenericsggmggplot2glassoglmnetgluegraphGSAgtablehugeICSICSNPigraphisobanditeratorslabelinglatticelifecyclelimmalongitudinalmagrittrMASSMatrixmclustminqamitoolsmulttestmvtnormnetworknumDerivpillarpkgconfigR6RColorBrewerRcppRcppArmadilloRcppEigenrlangS7scalesshapestatmodstatnet.commonsurveysurvivaltibbleutf8vctrsviridisLitewithr
