Background | Installation | Basic visualization | Visualizing multiple arrays | Probe-level linear models | Transformations | References
Package: mimager 1.37.0
Aaron Wolen
mimager: mimager: The Microarray Imager
Easily visualize and inspect microarrays for spatial artifacts.
Authors:
mimager_1.37.0.tar.gz
mimager_1.37.0.zip(r-4.7)mimager_1.37.0.zip(r-4.6)mimager_1.37.0.zip(r-4.5)
mimager_1.37.0.tgz(r-4.6-any)mimager_1.37.0.tgz(r-4.5-any)
mimager_1.37.0.tar.gz(r-4.7-any)mimager_1.37.0.tar.gz(r-4.6-any)
mimager_1.37.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
mimager/json (API)
| # Install 'mimager' in R: |
| install.packages('mimager', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/aaronwolen/mimager/issues
On BioConductor:mimager-1.37.0(bioc 3.24)mimager-1.36.0(bioc 3.23)
infrastructurevisualizationmicroarraybioconductorbioinformatics
Last updated from:cd2a6d5da2. Checks:1 WARNING, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 257 | ||
| linux-devel-x86_64 | OK | 375 | ||
| source / vignettes | OK | 315 | ||
| linux-release-x86_64 | OK | 427 | ||
| macos-release-arm64 | OK | 257 | ||
| macos-oldrel-arm64 | OK | 213 | ||
| windows-devel | OK | 364 | ||
| windows-release | OK | 355 | ||
| windows-oldrel | OK | 329 | ||
| wasm-release | OK | 194 |
Dependencies:abindaffxparseraffyaffyioaffyPLMBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicodetoolscpp11crayonDBIDelayedArrayfarverfastmapffforeachgcrmagenericsGenomicRangesgluegtableIRangesiteratorslabelinglatticelifecycleMatrixMatrixGenericsmatrixStatsmemoiseoligooligoClassespkgconfigpreprocessCoreR6RColorBrewerrlangRSQLiteS4ArraysS4VectorsscalesSeqinfoSparseArraySummarizedExperimentvctrsviridisLiteXVector
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Array rank | arank |
| Array relative log expression | arle |
| Microarray array | marray marray,AffyBatch-method marray,FeatureSet-method marray,oligoPLM-method marray,PLMset-method |
| Microarray image | mimage mimage,AffyBatch-method mimage,array-method mimage,FeatureSet-method mimage,oligoPLM-method mimage,PLMset-method |
| mimager: The Microarray Imager | mimager-package mimager |
