Package: metapod 1.13.0
metapod: Meta-Analyses on P-Values of Differential Analyses
Implements a variety of methods for combining p-values in differential analyses of genome-scale datasets. Functions can combine p-values across different tests in the same analysis (e.g., genomic windows in ChIP-seq, exons in RNA-seq) or for corresponding tests across separate analyses (e.g., replicated comparisons, effect of different treatment conditions). Support is provided for handling log-transformed input p-values, missing values and weighting where appropriate.
Authors:
metapod_1.13.0.tar.gz
metapod_1.13.0.zip(r-4.5)metapod_1.13.0.zip(r-4.4)metapod_1.13.0.zip(r-4.3)
metapod_1.13.0.tgz(r-4.4-x86_64)metapod_1.13.0.tgz(r-4.4-arm64)metapod_1.13.0.tgz(r-4.3-x86_64)metapod_1.13.0.tgz(r-4.3-arm64)
metapod_1.13.0.tar.gz(r-4.5-noble)metapod_1.13.0.tar.gz(r-4.4-noble)
metapod_1.13.0.tgz(r-4.4-emscripten)metapod_1.13.0.tgz(r-4.3-emscripten)
metapod.pdf |metapod.html✨
metapod/json (API)
NEWS
# Install 'metapod' in R: |
install.packages('metapod', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:metapod-1.13.0(bioc 3.20)metapod-1.12.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
multiplecomparisondifferentialpeakcalling
Last updated 6 months agofrom:107182538f. Checks:OK: 1 NOTE: 8. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 28 2024 |
R-4.5-win-x86_64 | NOTE | Sep 28 2024 |
R-4.5-linux-x86_64 | NOTE | Sep 28 2024 |
R-4.4-win-x86_64 | NOTE | Sep 28 2024 |
R-4.4-mac-x86_64 | NOTE | Sep 28 2024 |
R-4.4-mac-aarch64 | NOTE | Sep 28 2024 |
R-4.3-win-x86_64 | NOTE | Sep 28 2024 |
R-4.3-mac-x86_64 | NOTE | Sep 28 2024 |
R-4.3-mac-aarch64 | NOTE | Sep 28 2024 |
Exports:averageGroupedStatsaverageParallelStatscombineGroupedPValuescombineParallelPValuescountGroupedDirectioncountParallelDirectiongroupedBergergroupedFishergroupedHolmMingroupedPearsongroupedSimesgroupedStouffergroupedWilkinsonparallelBergerparallelFisherparallelHolmMinparallelPearsonparallelSimesparallelStoufferparallelWilkinsonsummarizeGroupedDirectionsummarizeParallelDirection
Dependencies:Rcpp