Package: levi 1.31.0

Jose Luiz Rybarczyk Filho

levi: Landscape Expression Visualization Interface

The tool integrates data from biological networks with transcriptomes, displaying a heatmap with surface curves to evidence the altered regions.

Authors:Rafael Pilan [aut], Isabelle Silva [ctb], Agnes Takeda [ctb], Jose Rybarczyk Filho [ctb, cre, ths]

levi_1.31.0.tar.gz
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levi_1.31.0.tgz(r-4.6-x86_64)levi_1.31.0.tgz(r-4.6-arm64)levi_1.31.0.tgz(r-4.5-x86_64)levi_1.31.0.tgz(r-4.5-arm64)
levi_1.31.0.tar.gz(r-4.7-arm64)levi_1.31.0.tar.gz(r-4.7-x86_64)levi_1.31.0.tar.gz(r-4.6-arm64)levi_1.31.0.tar.gz(r-4.6-x86_64)
levi_1.31.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
levi/json (API)

# Install 'levi' in R:

install.packages('levi', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Uses libs:

c++– GNU Standard C++ Library v3

On BioConductor:levi-1.31.0(bioc 3.24)levi-1.30.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

geneexpression sequencing network software cpp

3.30 score 6 scripts 348 downloads 3 exports 88 dependencies

Last updated from:49b18d8c63. Checks:5 WARNING, 7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time	Files	Syslog
bioc-checks	WARNING	169
linux-devel-arm64	NOTE	220
linux-devel-x86_64	NOTE	243
source / vignettes	OK	341
linux-release-arm64	NOTE	207
linux-release-x86_64	NOTE	274
macos-release-arm64	WARNING	134
macos-release-x86_64	WARNING	242
macos-oldrel-arm64	WARNING	104
macos-oldrel-x86_64	WARNING	303
windows-devel	NOTE	207
windows-release	NOTE	179
windows-oldrel	NOTE	158
wasm-release	OK	159

Exports:levi LEVIui readExpColumn

Dependencies:askpass base64enc brio bslib cachem callr cli colorspace commonmark cpp11 crayon crosstalk curl desc diffobj digest dplyr DT evaluate farver fastmap fontawesome fs generics ggplot2 glue gtable highr htmltools htmlwidgets httpuv httr igraph isoband jquerylib jsonlite knitr labeling later lattice lazyeval lifecycle magrittr Matrix memoise mime openssl otel pillar pkgbuild pkgconfig pkgload plyr praise processx promises ps R6 rappdirs RColorBrewer Rcpp reshape2 rlang rmarkdown rprojroot S7 sass scales shiny shinydashboard shinyjs sourcetools stringi stringr sys testthat tibble tidyselect tinytex utf8 vctrs viridisLite waldo withr xfun xml2 xtable yaml

levi - Landscape Expression Visualization Interface

Overview | Files | Gene Expression Levels | Biological Network | Graphical User Interface (GUI) | Script | Session information | Reference

Rendered fromlevi.Rmdusingknitr::rmarkdown

Last update: 2021-09-01
Started: 2018-10-04

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
levi	levi
LEVIui	LEVIui
readExpColumn	readExpColumn

Usage by other packages (reverse dependencies)