Package: iSEEhub 1.9.0

Kevin Rue-Albrecht

iSEEhub: iSEE for the Bioconductor ExperimentHub

This package defines a custom landing page for an iSEE app interfacing with the Bioconductor ExperimentHub. The landing page allows users to browse the ExperimentHub, select a data set, download and cache it, and import it directly into a Bioconductor iSEE app.

Authors:Kevin Rue-Albrecht [aut, cre]

iSEEhub_1.9.0.tar.gz
iSEEhub_1.9.0.zip(r-4.5)iSEEhub_1.9.0.zip(r-4.4)iSEEhub_1.9.0.zip(r-4.3)
iSEEhub_1.9.0.tgz(r-4.4-any)iSEEhub_1.9.0.tgz(r-4.3-any)
iSEEhub_1.9.0.tar.gz(r-4.5-noble)iSEEhub_1.9.0.tar.gz(r-4.4-noble)
iSEEhub_1.9.0.tgz(r-4.4-emscripten)iSEEhub_1.9.0.tgz(r-4.3-emscripten)
iSEEhub.pdf |iSEEhub.html
iSEEhub/json (API)
NEWS

# Install 'iSEEhub' in R:
install.packages('iSEEhub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/isee/iseehub/issues

On BioConductor:iSEEhub-1.7.1(bioc 3.20)iSEEhub-1.6.0(bioc 3.19)

dataimportimmunooncology infrastructureshinyappssinglecellsoftwarebioconductorbioconductor-packagehacktoberfestisee

5.38 score 3 stars 4 scripts 357 downloads 1 exports 134 dependencies

Last updated 26 days agofrom:bd09a3b30d. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 30 2024
R-4.5-winNOTEOct 31 2024
R-4.5-linuxNOTEOct 30 2024
R-4.4-winNOTEOct 31 2024
R-4.4-macNOTEOct 31 2024
R-4.3-winNOTEOct 31 2024
R-4.3-macNOTEOct 31 2024

Exports:iSEEhub

Dependencies:abindAnnotationDbiAnnotationHubaskpassbase64encBiobaseBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobbslibcachemcirclizecliclueclustercodetoolscolorspacecolourpickercommonmarkComplexHeatmapcpp11crayoncrosstalkcurlDBIdbplyrDelayedArraydigestdoParalleldplyrDTevaluateExperimentHubfansifarverfastmapfilelockfontawesomeforeachfsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesGetoptLongggplot2ggrepelGlobalOptionsgluegtablehighrhtmltoolshtmlwidgetshttpuvhttrigraphIRangesiSEEisobanditeratorsjquerylibjsonliteKEGGRESTknitrlabelinglaterlatticelazyevallifecyclelistviewermagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimeminiUImunsellnlmeopensslpillarpkgconfigplogrpngpromisespurrrR6rappdirsRColorBrewerRcpprintrojsrjsonrlangrmarkdownRSQLiteS4ArraysS4VectorssassscalesshapeshinyshinyAceshinydashboardshinyjsshinyWidgetsSingleCellExperimentsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8vctrsviporviridisLitewithrxfunxtableXVectoryamlzlibbioc

Contributing to iSEEhub

Rendered fromcontributing.Rmdusingknitr::rmarkdownon Oct 30 2024.

Last update: 2022-08-15
Started: 2022-08-15

Introduction to iSEEhub

Rendered fromiSEEhub.Rmdusingknitr::rmarkdownon Oct 30 2024.

Last update: 2022-09-13
Started: 2022-08-13