Package: iSEEhub 1.9.0

Kevin Rue-Albrecht

iSEEhub: iSEE for the Bioconductor ExperimentHub

This package defines a custom landing page for an iSEE app interfacing with the Bioconductor ExperimentHub. The landing page allows users to browse the ExperimentHub, select a data set, download and cache it, and import it directly into a Bioconductor iSEE app.

Authors:Kevin Rue-Albrecht [aut, cre]

iSEEhub_1.9.0.tar.gz
iSEEhub_1.9.0.zip(r-4.5)iSEEhub_1.9.0.zip(r-4.4)iSEEhub_1.9.0.zip(r-4.3)
iSEEhub_1.9.0.tgz(r-4.5-any)iSEEhub_1.9.0.tgz(r-4.4-any)iSEEhub_1.9.0.tgz(r-4.3-any)
iSEEhub_1.9.0.tar.gz(r-4.5-noble)iSEEhub_1.9.0.tar.gz(r-4.4-noble)
iSEEhub_1.9.0.tgz(r-4.4-emscripten)iSEEhub_1.9.0.tgz(r-4.3-emscripten)
iSEEhub.pdf |iSEEhub.html
iSEEhub/json (API)
NEWS

# Install 'iSEEhub' in R:
install.packages('iSEEhub', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/isee/iseehub/issues

On BioConductor:iSEEhub-1.9.0(bioc 3.21)iSEEhub-1.8.0(bioc 3.20)

dataimportimmunooncology infrastructureshinyappssinglecellsoftwarebioconductorbioconductor-packagehacktoberfestisee

5.56 score 3 stars 4 scripts 357 downloads 1 exports 133 dependencies

Last updated 4 months agofrom:bd09a3b30d. Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 27 2025
R-4.5-winNOTEFeb 27 2025
R-4.5-macNOTEFeb 27 2025
R-4.5-linuxNOTEFeb 27 2025
R-4.4-winNOTEFeb 27 2025
R-4.4-macNOTEFeb 27 2025
R-4.3-winNOTEFeb 27 2025
R-4.3-macNOTEFeb 27 2025

Exports:iSEEhub

Dependencies:abindAnnotationDbiAnnotationHubaskpassbase64encBiobaseBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobbslibcachemcirclizecliclueclustercodetoolscolorspacecolourpickercommonmarkComplexHeatmapcpp11crayoncrosstalkcurlDBIdbplyrDelayedArraydigestdoParalleldplyrDTevaluateExperimentHubfansifarverfastmapfilelockfontawesomeforeachfsgenericsGenomeInfoDbGenomeInfoDbDataGenomicRangesGetoptLongggplot2ggrepelGlobalOptionsgluegtablehighrhtmltoolshtmlwidgetshttpuvhttrigraphIRangesiSEEisobanditeratorsjquerylibjsonliteKEGGRESTknitrlabelinglaterlatticelazyevallifecyclelistviewermagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemgcvmimeminiUImunsellnlmeopensslpillarpkgconfigplogrpngpromisespurrrR6rappdirsRColorBrewerRcpprintrojsrjsonrlangrmarkdownRSQLiteS4ArraysS4VectorssassscalesshapeshinyshinyAceshinydashboardshinyjsshinyWidgetsSingleCellExperimentsourcetoolsSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselecttinytexUCSC.utilsutf8vctrsviporviridisLitewithrxfunxtableXVectoryaml

Contributing to iSEEhub

Rendered fromcontributing.Rmdusingknitr::rmarkdownon Feb 27 2025.

Last update: 2022-08-15
Started: 2022-08-15

Introduction to iSEEhub

Rendered fromiSEEhub.Rmdusingknitr::rmarkdownon Feb 27 2025.

Last update: 2022-09-13
Started: 2022-08-13