Package 'iSEEhub'

Title: iSEE for the Bioconductor ExperimentHub
Description: This package defines a custom landing page for an iSEE app interfacing with the Bioconductor ExperimentHub. The landing page allows users to browse the ExperimentHub, select a data set, download and cache it, and import it directly into a Bioconductor iSEE app.
Authors: Kevin Rue-Albrecht [aut, cre]
Maintainer: Kevin Rue-Albrecht <[email protected]>
License: Artistic-2.0
Version: 1.7.0
Built: 2024-07-23 05:32:00 UTC
Source: https://github.com/bioc/iSEEhub

Help Index


iSEEhub app

Description

iSEEhub app

Usage

iSEEhub(ehub, runtime_install = FALSE)

Arguments

ehub

An ExperimentHub() object.

runtime_install

A logical scalar indicating whether the app may allow users whether to install data set dependencies at runtime using BiocManager::install() through a modal prompt.

Value

An iSEE() app with a custom landing page interfacing with ehub.

Examples

library(ExperimentHub)
ehub <- ExperimentHub()

app <- iSEEhub(ehub)

if (interactive()) {
  shiny::runApp(app, port = 1234)
}