iModMix -integrative Modules for Multi-omics data
Introduction | Installation | Download the package from Bioconductor | Load the package into R session | Launching the iModMix Shiny App | Launch the app locally | Access the app online | Example to integrate 2 omics datasets | Generate modules | Load expression Data 1 and metadata from clear cell renal cell carcinoma | Perform preprocessing of data | Perform Partial correlation analysis, network construction and module eigengene calculation | Load expression Data 2 and perform partial correlation analysis, network construction and module eigengene calculation | Relate modules to phenotype | Multi-omics analysis: Integration of Data 1 and Data 2 | Enrichment analysis using gene Symbol | Working with Bioconductor's SummarizedExperiment class | Session Information