Overview of the Analysis | Analysis of an RNA-Seq Dataset | Preparation of the dataset | Fourthcorner Analysis with stat | RLQ with ord | Combination of Results | Comparison with Other Methods | Gene Annotation | Installation | References
Package: covRNA 1.39.0
Lara Urban
covRNA: Multivariate Analysis of Transcriptomic Data
This package provides the analysis methods fourthcorner and RLQ analysis for large-scale transcriptomic data.
Authors:
covRNA_1.39.0.tar.gz
covRNA_1.39.0.zip(r-4.7-any)covRNA_1.39.0.zip(r-4.6-any)covRNA_1.39.0.zip(r-4.5-any)
covRNA_1.39.0.tgz(r-4.6-any)covRNA_1.39.0.tgz(r-4.5-any)
covRNA_1.39.0.tar.gz(r-4.7-any)covRNA_1.39.0.tar.gz(r-4.6-any)
covRNA_1.39.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
covRNA/json (API)
| # Install 'covRNA' in R: |
| install.packages('covRNA', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Datasets:
- Baca - The Baca dataset
On BioConductor:covRNA-1.39.0(bioc 3.24)covRNA-1.38.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated from:cb8c26b1bb. Checks:1 ERROR, 9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 155 | ||
| linux-devel | OK | 375 | ||
| source / vignettes | OK | 369 | ||
| linux-release | OK | 337 | ||
| macos-release | OK | 223 | ||
| macos-oldrel | OK | 210 | ||
| windows-devel | OK | 224 | ||
| windows-release | OK | 226 | ||
| windows-oldrel | OK | 218 | ||
| wasm-release | OK | 113 |
Exports:ordplot.ordplot.statstatvis
Dependencies:ade4annotateAnnotationDbiaskpassBiobaseBiocBaseUtilsBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgenefiltergenericsgluehttrIRangesjsonliteKEGGRESTlatticelifecycleMASSMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpixmappkgconfigpngR6RcppRcppArmadillorlangRSQLiteS4VectorsSeqinfospsurvivalsysvctrsXMLxtableXVector
