Package: biocGraph 1.75.0

Florian Hahne

biocGraph: Graph examples and use cases in Bioinformatics

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Authors:Li Long <[email protected]>, Robert Gentleman <[email protected]>, Seth Falcon <[email protected]> Florian Hahne <[email protected]>

biocGraph_1.75.0.tar.gz
biocGraph_1.75.0.zip(r-4.7)biocGraph_1.75.0.zip(r-4.6)biocGraph_1.75.0.zip(r-4.5)
biocGraph_1.75.0.tgz(r-4.6-any)biocGraph_1.75.0.tgz(r-4.5-any)
biocGraph_1.75.0.tar.gz(r-4.7-any)biocGraph_1.75.0.tar.gz(r-4.6-any)
biocGraph_1.75.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
biocGraph/json (API)

# Install 'biocGraph' in R:
install.packages('biocGraph', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:biocGraph-1.75.0(bioc 3.24)biocGraph-1.74.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

visualizationgraphandnetwork

3.60 score 4 scripts 602 downloads 1 mentions 1 exports 43 dependencies

Last updated from:82db6f65d5. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR179
linux-devel-x86_64NOTE234
source / vignettesOK240
linux-release-x86_64NOTE330
macos-release-arm64NOTE202
macos-oldrel-arm64NOTE176
windows-develNOTE167
windows-releaseNOTE165
windows-oldrelNOTE180
wasm-releaseOK171

Exports:imageMap

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgeneplottergenericsgluegraphhttrIRangesjsonliteKEGGRESTlatticelifecyclememoisemimeopensslpkgconfigpngR6RColorBrewerRgraphvizrlangRSQLiteS4VectorsSeqinfosysvctrsXMLxtableXVector

Examples of plotting graphs Using Rgraphviz

Rendered frombiocGraph.Rnwusingutils::Sweaveon Jun 03 2026.

Last update: 2013-11-01
Started: 2013-11-01

HOWTO layout pathways

Rendered fromlayingOutPathways.Rnwusingutils::Sweaveon Jun 03 2026.

Last update: 2013-11-01
Started: 2013-11-01

Readme and manuals

Help Manual

Help pageTopics
Write an HTML IMG tag together with a MAP image map.imageMap imageMap,graph,connection,list,character-method imageMap,graph-method imageMap,Ragraph,connection,list,character-method imageMap,Ragraph-method imageMap-methods