Package: biocGraph 1.69.0

Florian Hahne

biocGraph: Graph examples and use cases in Bioinformatics

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Authors:Li Long <[email protected]>, Robert Gentleman <[email protected]>, Seth Falcon <[email protected]> Florian Hahne <[email protected]>

biocGraph_1.69.0.tar.gz
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biocGraph.pdf |biocGraph.html
biocGraph/json (API)

# Install 'biocGraph' in R:
install.packages('biocGraph', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:biocGraph-1.67.0(bioc 3.20)biocGraph-1.66.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

visualizationgraphandnetwork

3.60 score 576 downloads 1 exports 46 dependencies

Last updated 23 days agofrom:f12102da18. Checks:OK: 1 NOTE: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 30 2024
R-4.5-winNOTEOct 30 2024
R-4.5-linuxNOTEOct 30 2024
R-4.4-winNOTEOct 30 2024
R-4.4-macNOTEOct 30 2024
R-4.3-winNOTEOct 30 2024
R-4.3-macNOTEOct 30 2024

Exports:imageMap

Dependencies:annotateAnnotationDbiaskpassBiobaseBiocGenericsBiostringsbitbit64blobcachemclicpp11crayoncurlDBIfastmapgeneplotterGenomeInfoDbGenomeInfoDbDatagluegraphhttrIRangesjsonliteKEGGRESTlatticelifecyclememoisemimeopensslpkgconfigplogrpngR6RColorBrewerRgraphvizrlangRSQLiteS4VectorssysUCSC.utilsvctrsXMLxtableXVectorzlibbioc

Examples of plotting graphs Using Rgraphviz

Rendered frombiocGraph.Rnwusingutils::Sweaveon Oct 30 2024.

Last update: 2013-11-01
Started: 2013-11-01

HOWTO layout pathways

Rendered fromlayingOutPathways.Rnwusingutils::Sweaveon Oct 30 2024.

Last update: 2013-11-01
Started: 2013-11-01

Readme and manuals

Help Manual

Help pageTopics
Write an HTML IMG tag together with a MAP image map.imageMap imageMap,graph,connection,list,character-method imageMap,graph-method imageMap,Ragraph,connection,list,character-method imageMap,Ragraph-method imageMap-methods