Package: annotation 1.37.0

Bioconductor Package Maintainer

annotation: Genomic Annotation Resources

Annotation resources make up a significant proportion of the Bioconductor project. And there are also a diverse set of online resources available which are accessed using specific packages. This walkthrough will describe the most popular of these resources and give some high level examples on how to use them.

Authors:Marc RJ Carlson [aut], Hervé Pagès [aut], Sonali Arora [aut], Valerie Obenchain [aut], Martin Morgan [aut], Lori Shepherd [ctb], Bioconductor Package Maintainer [cre]

annotation_1.37.0.tar.gz
annotation_1.37.0.zip(r-4.7-any)annotation_1.37.0.zip(r-4.6-any)annotation_1.37.0.zip(r-4.5-any)
annotation_1.37.0.tgz(r-4.6-any)annotation_1.37.0.tgz(r-4.5-any)
annotation_1.37.0.tar.gz(r-4.7-any)annotation_1.37.0.tar.gz(r-4.6-any)
annotation_1.37.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
annotation/json (API)

# Install 'annotation' in R:
install.packages('annotation', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

annotationworkflowworkflow

1.48 score 0 exports 107 dependencies

Last updated from:77a311d732. Checks:8 WARNING, 1 ERROR, 1 OK. Indexed: yes.
A new build is currently in progress.

TargetResultTimeFilesSyslog
bioc-checksWARNING400
linux-develWARNING415
source / vignettesERROR625
linux-releaseWARNING541
macos-releaseWARNING323
macos-oldrelWARNING211
windows-develWARNING513
windows-releaseWARNING494
windows-oldrelWARNING499
wasm-releaseOK381

Exports:

Dependencies:abindAnnotationDbiAnnotationHubaskpassBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocIOBiocManagerBiocParallelBiocVersionbiomaRtBiostringsbitbit64bitopsblobBSgenomeBSgenome.Hsapiens.UCSC.hg19cachemcigarilloclicodetoolscpp11crayoncurlDBIdbplyrDelayedArraydplyrfastmapfilelockformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesglueGO.dbgraphhmsHomo.sapienshttrhttr2IRangesjsonliteKEGGRESTlambda.rlatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslorg.Hs.eg.dborg.Mm.eg.dbOrganismDbipillarpkgconfigpngprettyunitsprogresspurrrR6rappdirsRBGLRCurlrestfulrRhtslibrjsonrlangRsamtoolsRSQLitertracklayerS4ArraysS4VectorsSeqinfosnowSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselectTxDb.Athaliana.BioMart.plantsmart22TxDb.Hsapiens.UCSC.hg19.knownGeneTxDb.Hsapiens.UCSC.hg38.knownGeneTxDb.Mmusculus.UCSC.mm10.ensGeneUCSC.utilsutf8VariantAnnotationvctrswithrXMLxml2XVectoryaml