Package: Rhtslib 3.9.0

Hervé Pagès

Rhtslib: HTSlib high-throughput sequencing library as an R package

This package provides version 1.18 of the 'HTSlib' C library for high-throughput sequence analysis. The package is primarily useful to developers of other R packages who wish to make use of HTSlib. Motivation and instructions for use of this package are in the vignette, vignette(package="Rhtslib", "Rhtslib").

Authors:Nathaniel Hayden [led, aut], Martin Morgan [aut], Hervé Pagès [aut, cre], Tomas Kalibera [ctb], Jeroen Ooms [ctb]

Rhtslib_3.9.0.tar.gz
Rhtslib_3.9.0.zip(r-4.7)Rhtslib_3.9.0.zip(r-4.6)Rhtslib_3.9.0.zip(r-4.5)
Rhtslib_3.9.0.tgz(r-4.6-x86_64)Rhtslib_3.9.0.tgz(r-4.6-arm64)Rhtslib_3.9.0.tgz(r-4.5-x86_64)Rhtslib_3.9.0.tgz(r-4.5-arm64)
Rhtslib_3.9.0.tar.gz(r-4.7-arm64)Rhtslib_3.9.0.tar.gz(r-4.7-x86_64)Rhtslib_3.9.0.tar.gz(r-4.6-arm64)Rhtslib_3.9.0.tar.gz(r-4.6-x86_64)
Rhtslib_3.9.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
Rhtslib/json (API)
NEWS

# Install 'Rhtslib' in R:

install.packages('Rhtslib', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/bioconductor/rhtslib/issues

Uses libs:

curl– Easy-to-use client-side URL transfer library
bzip2– High-quality block-sorting file compressor library
xz-utils– XZ-format compression library
zlib– Compression library

On BioConductor:Rhtslib-3.9.0(bioc 3.24)Rhtslib-3.8.0(bioc 3.23)

dataimport sequencing bioconductor-package core-package curl bzip2 xz-utils zlib

11.06 score 11 stars 612 packages 3 scripts 48k downloads 1 mentions 1 exports 0 dependencies

Last updated from:29c0999d59. Checks:12 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	WARNING	188
linux-devel-arm64	WARNING	190
linux-devel-x86_64	WARNING	178
source / vignettes	OK	260
linux-release-arm64	WARNING	168
linux-release-x86_64	WARNING	185
macos-release-arm64	WARNING	133
macos-release-x86_64	WARNING	227
macos-oldrel-arm64	WARNING	101
macos-oldrel-x86_64	WARNING	321
windows-devel	WARNING	188
windows-release	WARNING	192
windows-oldrel	WARNING	266
wasm-release	OK	119