Package: MsBackendRawFileReader 1.11.3

Christian Panse

MsBackendRawFileReader: Mass Spectrometry Backend for Reading Thermo Fisher Scientific raw Files

implements a MsBackend for the Spectra package using Thermo Fisher Scientific's NewRawFileReader .Net libraries. The package is generalizing the functionality introduced by the rawrr package Methods defined in this package are supposed to extend the Spectra Bioconductor package.

Authors:Christian Panse [aut, cre], Tobias Kockmann [aut], Roger Gine Bertomeu [ctb]

MsBackendRawFileReader_1.11.3.tar.gz
MsBackendRawFileReader_1.11.3.zip(r-4.5)MsBackendRawFileReader_1.11.3.zip(r-4.4)MsBackendRawFileReader_1.11.3.zip(r-4.3)
MsBackendRawFileReader_1.11.3.tgz(r-4.4-any)MsBackendRawFileReader_1.11.3.tgz(r-4.3-any)
MsBackendRawFileReader_1.11.3.tar.gz(r-4.5-noble)MsBackendRawFileReader_1.11.3.tar.gz(r-4.4-noble)
MsBackendRawFileReader.pdf |MsBackendRawFileReader.html
MsBackendRawFileReader/json (API)
NEWS

# Install 'MsBackendRawFileReader' in R:
install.packages('MsBackendRawFileReader', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/fgcz/msbackendrawfilereader/issues

On BioConductor:MsBackendRawFileReader-1.11.2(bioc 3.20)MsBackendRawFileReader-1.10.0(bioc 3.19)

bioconductor-package

7 exports 1.24 score 22 dependencies

Last updated 30 days agofrom:eced04e040

Exports:filterScanintensityioBenchmarkMsBackendRawFileReadermzscanIndexscanType

Dependencies:BHBiocGenericsBiocParallelclueclustercodetoolscpp11formatRfsfutile.loggerfutile.optionsIRangeslambda.rMASSMetaboCoreUtilsMsCoreUtilsProtGenericsrawrrRcppS4VectorssnowSpectra

On Using and Extending the MsBackendRawFileReader Backend

Rendered fromMsBackendRawFileReader.Rmdusingknitr::rmarkdownon Jun 11 2024.

Last update: 2023-07-12
Started: 2019-06-22

Readme and manuals

Help Manual

Help pageTopics
RawFileReader_read_peaks benchmarkioBenchmark
MsBackendRawFileReaderfilterScan,MsBackendRawFileReader-method MsBackendRawFileReader scanIndex,MsBackendRawFileReader-method scanType,MsBackendRawFileReader-method
RawFileReader-based backendMsBackendRawFileReader-class