Package: MOGAMUN 1.23.0
MOGAMUN: MOGAMUN: A Multi-Objective Genetic Algorithm to Find Active Modules in Multiplex Biological Networks
MOGAMUN is a multi-objective genetic algorithm that identifies active modules in a multiplex biological network. This allows analyzing different biological networks at the same time. MOGAMUN is based on NSGA-II (Non-Dominated Sorting Genetic Algorithm, version II), which we adapted to work on networks.
Authors:
MOGAMUN_1.23.0.tar.gz
MOGAMUN_1.23.0.zip(r-4.7-any)MOGAMUN_1.23.0.zip(r-4.6-any)MOGAMUN_1.23.0.zip(r-4.5-any)
MOGAMUN_1.23.0.tgz(r-4.6-any)MOGAMUN_1.23.0.tgz(r-4.5-any)
MOGAMUN_1.23.0.tar.gz(r-4.7-any)MOGAMUN_1.23.0.tar.gz(r-4.6-any)
MOGAMUN_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
MOGAMUN/json (API)
| # Install 'MOGAMUN' in R: |
| install.packages('MOGAMUN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/elvanov/mogamun/issues
On BioConductor:MOGAMUN-1.23.0(bioc 3.24)MOGAMUN-1.22.0(bioc 3.23)
systemsbiologygraphandnetworkdifferentialexpressionbiomedicalinformaticstranscriptomicsclusteringnetwork
Last updated from:4e05af7661. Checks:1 WARNING, 7 OK, 2 ERROR. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 159 | ||
| linux-devel | OK | 217 | ||
| source / vignettes | OK | 260 | ||
| linux-release | OK | 209 | ||
| macos-release | OK | 96 | ||
| macos-oldrel | ERROR | 126 | ||
| windows-devel | OK | 109 | ||
| windows-release | OK | 115 | ||
| windows-oldrel | ERROR | 99 | ||
| wasm-release | OK | 152 |
Exports:mogamun_initmogamun_load_datamogamun_postprocessmogamun_run
Dependencies:askpassbackportsbase64encbase64urlBHBiocGenericsBiocParallelbitopscaToolsclicodetoolscpp11crayoncurldigestevaluatefastmapformatRfsfutile.loggerfutile.optionsgenericsgluegplotsgraphgtoolshtmltoolshttrigraphIRdisplayIRkerneljsonliteKernSmoothlambda.rlatticelifecyclemagrittrMatrixmimeopensslpbdZMQpillarpkgconfigR6RColorBrewerRCurlRCy3reprRJSONIOrlangRUnitsnowstringistringrsysutf8uuidvctrsXML
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| mogamun_init | mogamun_init |
| mogamun_load_data | mogamun_load_data |
| mogamun_postprocess | mogamun_postprocess |
| mogamun_run | mogamun_run |
