Package: MOGAMUN 1.23.0

Elva-María Novoa-del-Toro

MOGAMUN: MOGAMUN: A Multi-Objective Genetic Algorithm to Find Active Modules in Multiplex Biological Networks

MOGAMUN is a multi-objective genetic algorithm that identifies active modules in a multiplex biological network. This allows analyzing different biological networks at the same time. MOGAMUN is based on NSGA-II (Non-Dominated Sorting Genetic Algorithm, version II), which we adapted to work on networks.

Authors:Elva-María Novoa-del-Toro [aut, cre]

MOGAMUN_1.23.0.tar.gz
MOGAMUN_1.23.0.zip(r-4.7)MOGAMUN_1.23.0.zip(r-4.6)MOGAMUN_1.23.0.zip(r-4.5)
MOGAMUN_1.23.0.tgz(r-4.6-any)MOGAMUN_1.23.0.tgz(r-4.5-any)
MOGAMUN_1.23.0.tar.gz(r-4.7-any)MOGAMUN_1.23.0.tar.gz(r-4.6-any)
MOGAMUN_1.23.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
MOGAMUN/json (API)
NEWS

# Install 'MOGAMUN' in R:
install.packages('MOGAMUN', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/elvanov/mogamun/issues

On BioConductor:MOGAMUN-1.23.0(bioc 3.24)MOGAMUN-1.22.0(bioc 3.23)

systemsbiologygraphandnetworkdifferentialexpressionbiomedicalinformaticstranscriptomicsclusteringnetwork

6.07 score 13 stars 5 scripts 298 downloads 3 mentions 4 exports 59 dependencies

Last updated from:4e05af7661. Checks:1 NOTE, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksNOTE165
linux-devel-x86_64OK191
source / vignettesOK211
linux-release-x86_64OK190
macos-release-arm64OK127
macos-oldrel-arm64OK144
windows-develOK526
windows-releaseOK139
windows-oldrelOK455
wasm-releaseOK125

Exports:mogamun_initmogamun_load_datamogamun_postprocessmogamun_run

Dependencies:askpassbackportsbase64encbase64urlBHBiocGenericsBiocParallelbitopscaToolsclicodetoolscpp11crayoncurldigestevaluatefastmapformatRfsfutile.loggerfutile.optionsgenericsgluegplotsgraphgtoolshtmltoolshttrigraphIRdisplayIRkerneljsonliteKernSmoothlambda.rlatticelifecyclemagrittrMatrixmimeopensslpbdZMQpillarpkgconfigR6RColorBrewerRCurlRCy3reprRJSONIOrlangRUnitsnowstringistringrsysutf8uuidvctrsXML

MOGAMUN

Rendered fromMOGAMUN_Vignette.Rmdusingknitr::knitron May 30 2026.

Last update: 2021-02-12
Started: 2020-08-14

Readme and manuals

Help Manual

Help pageTopics
mogamun_initmogamun_init
mogamun_load_datamogamun_load_data
mogamun_postprocessmogamun_postprocess
mogamun_runmogamun_run