Package: MACSr 1.13.0

Qiang Hu

MACSr: MACS: Model-based Analysis for ChIP-Seq

The Model-based Analysis of ChIP-Seq (MACS) is a widely used toolkit for identifying transcript factor binding sites. This package is an R wrapper of the lastest MACS3.

Authors:Qiang Hu [aut, cre]

MACSr_1.13.0.tar.gz
MACSr_1.13.0.zip(r-4.5)MACSr_1.13.0.zip(r-4.4)MACSr_1.13.0.zip(r-4.3)
MACSr_1.13.0.tgz(r-4.4-any)MACSr_1.13.0.tgz(r-4.3-any)
MACSr_1.13.0.tar.gz(r-4.5-noble)MACSr_1.13.0.tar.gz(r-4.4-noble)
MACSr_1.13.0.tgz(r-4.4-emscripten)MACSr_1.13.0.tgz(r-4.3-emscripten)
MACSr.pdf |MACSr.html✨
MACSr/json (API)
NEWS

Peer review:

On BioConductor:MACSr-1.13.0(bioc 3.20)MACSr-1.12.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

bioconductor-package

14 exports 0.91 score 70 dependencies

Last updated 2 months agofrom:d2e575270e

Exports:bdgbroadcallbdgcmpbdgdiffbdgoptbdgpeakcallcallpeakcallvarcmbrepsfilterduphmmratacpileuppredictdrandsamplerefinepeak

Dependencies:AnnotationDbiAnnotationHubaskpassbasiliskbasilisk.utilsBiobaseBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrdir.expirydplyrExperimentHubfansifastmapfilelockgenericsGenomeInfoDbGenomeInfoDbDataglueherehttrIRangesjsonliteKEGGRESTlatticelifecyclemagrittrMatrixmemoisemimeopensslpillarpkgconfigplogrpngpurrrR6rappdirsRcppRcppTOMLreticulaterlangrprojrootRSQLiteS4VectorsstringistringrsystibbletidyrtidyselectUCSC.utilsutf8vctrswithrXVectoryamlzlibbioc