Package: GEOsubmission 1.59.0
Alexandre Kuhn
GEOsubmission: Prepares microarray data for submission to GEO
Helps to easily submit a microarray dataset and the associated sample information to GEO by preparing a single file for upload (direct deposit).
Authors:
GEOsubmission_1.59.0.tar.gz
GEOsubmission_1.59.0.zip(r-4.5)GEOsubmission_1.59.0.zip(r-4.4)GEOsubmission_1.59.0.zip(r-4.3)
GEOsubmission_1.59.0.tgz(r-4.5-any)GEOsubmission_1.59.0.tgz(r-4.4-any)GEOsubmission_1.59.0.tgz(r-4.3-any)
GEOsubmission_1.59.0.tar.gz(r-4.5-noble)GEOsubmission_1.59.0.tar.gz(r-4.4-noble)
GEOsubmission_1.59.0.tgz(r-4.4-emscripten)GEOsubmission_1.59.0.tgz(r-4.3-emscripten)
GEOsubmission.pdf |GEOsubmission.html✨
GEOsubmission/json (API)
| # Install 'GEOsubmission' in R: |
| install.packages('GEOsubmission', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:GEOsubmission-1.59.0(bioc 3.21)GEOsubmission-1.58.0(bioc 3.20)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 4 months agofrom:d655fdcfb7. Checks:8 OK. Indexed: yes.
| Target | Result | Latest binary |
|---|---|---|
| Doc / Vignettes | OK | Jan 28 2025 |
| R-4.5-win | OK | Jan 28 2025 |
| R-4.5-mac | OK | Jan 28 2025 |
| R-4.5-linux | OK | Jan 28 2025 |
| R-4.4-win | OK | Jan 28 2025 |
| R-4.4-mac | OK | Jan 28 2025 |
| R-4.3-win | OK | Jan 28 2025 |
| R-4.3-mac | OK | Jan 28 2025 |
Exports:microarray2soft
Dependencies:affyaffyioBiobaseBiocGenericsBiocManagergenericspreprocessCore
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| expressionNormalized.txt | expressionNormalized |
| Prepares microarray data for submission to GEO | microarray2soft |
| sample1.CEL | sample1 |
| sample2.CEL | sample2 |
| sampleInfo.txt | sampleInfo |
| seriesInfo.txt | seriesInfo |
