{
  "_id": "6ad8a6b4eae73c505b850e8f",
  "Package": "GEOsubmission",
  "Version": "1.65.0",
  "Date": "2010-04-19",
  "Title": "Prepares microarray data for submission to GEO",
  "Author": "Alexandre Kuhn <alexandre.m.kuhn@gmail.com>",
  "Maintainer": "Alexandre Kuhn <alexandre.m.kuhn@gmail.com>",
  "Description": "Helps to easily submit a microarray dataset and the\nassociated sample information to GEO by preparing a single file\nfor upload (direct deposit).",
  "biocViews": "Microarray",
  "License": "GPL (>= 2)",
  "ZipData": "no",
  "Config/pak/sysreqs": "zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:34:37 UTC",
  "RemoteUrl": "https://github.com/bioc/GEOsubmission",
  "RemoteRef": "HEAD",
  "RemoteSha": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-21 11:45:14 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "GEOsubmission_1.65.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/1e98590984cf5a97d40622487469d5fc8c582380304ced3a5a9a3bce91d84961",
  "_filesize": 165217,
  "_sha256": "1e98590984cf5a97d40622487469d5fc8c582380304ced3a5a9a3bce91d84961",
  "_expires": "2027-01-29T11:49:05.000Z",
  "_created": "2026-10-21T11:45:14.000Z",
  "_published": "2026-10-21T11:49:07.945Z",
  "_upstream": "https://github.com/bioc/GEOsubmission",
  "_status": "success",
  "_maintainer": {
    "name": "Alexandre Kuhn",
    "email": "alexandre.m.kuhn@gmail.com",
    "login": "alexandremkuhn",
    "description": "",
    "uuid": 12440122
  },
  "_jobs": [
    {
      "job": 119202755020,
      "time": 131,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "12343621213"
    },
    {
      "job": 119202755139,
      "time": 165,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12343750994"
    },
    {
      "job": 119202755098,
      "time": 201,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12343012074"
    },
    {
      "job": 119202755185,
      "time": 85,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12343910744"
    },
    {
      "job": 119202755367,
      "time": 77,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12343531074"
    },
    {
      "job": 119201647718,
      "time": 158,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12343465679"
    },
    {
      "job": 119202755104,
      "time": 86,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "12343381254"
    },
    {
      "job": 119202755079,
      "time": 88,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "12343765796"
    },
    {
      "job": 119202755173,
      "time": 77,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "12342852296"
    },
    {
      "job": 119202755229,
      "time": 63,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "12343621005"
    }
  ],
  "_bioccheck": {
    "error": 1,
    "warning": 2,
    "note": 14
  },
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988",
  "_commit": {
    "id": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
    "author": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "committer": "A Wokaty <andres.wokaty@sph.cuny.edu>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379677
  },
  "_distro": "resolute",
  "_host": "GitHub-Actions",
  "_registered": true,
  "_dependencies": [
    {
      "package": "affy",
      "role": "Imports"
    },
    {
      "package": "Biobase",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.65.0",
      "bioc": "3.24",
      "repository": "bioc"
    },
    {
      "branch": "release",
      "version": "1.64.0",
      "bioc": "3.23",
      "repository": "bioc"
    }
  ],
  "_topics": [
    "microarray"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 479,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_downloads": {
    "count": 530,
    "source": "https://www.bioconductor.org/packages/stats/bioc/GEOsubmission"
  },
  "_searchresults": 3,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/GEOsubmission.html",
    "extra/manual.pdf"
  ],
  "_realowner": "bioc",
  "_cranurl": false,
  "_exports": [
    "microarray2soft"
  ],
  "_help": [
    {
      "page": "expresssionNormalized",
      "title": "expressionNormalized.txt",
      "topics": [
        "expressionNormalized"
      ]
    },
    {
      "page": "microarray2soft",
      "title": "Prepares microarray data for submission to GEO",
      "topics": [
        "microarray2soft"
      ]
    },
    {
      "page": "sample1",
      "title": "sample1.CEL",
      "topics": [
        "sample1"
      ]
    },
    {
      "page": "sample2",
      "title": "sample2.CEL",
      "topics": [
        "sample2"
      ]
    },
    {
      "page": "sampleInfo",
      "title": "sampleInfo.txt",
      "topics": [
        "sampleInfo"
      ]
    },
    {
      "page": "seriesInfo",
      "title": "seriesInfo.txt",
      "topics": [
        "seriesInfo"
      ]
    }
  ],
  "_rundeps": [
    "affy",
    "affyio",
    "Biobase",
    "BiocGenerics",
    "BiocManager",
    "generics",
    "preprocessCore"
  ],
  "_vignettes": [
    {
      "source": "GEOsubmission.Rnw",
      "filename": "GEOsubmission.pdf",
      "title": "GEOsubmission Overview",
      "engine": "utils::Sweave",
      "headings": [
        "Summary",
        "Introduction",
        "Principle",
        "Example usage",
        "Session Information"
      ],
      "created": "2013-11-01 20:13:17",
      "modified": "2020-03-27 20:57:53",
      "commits": 3
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "geosubmission",
  "_universes": [
    "bioc",
    "alexandremkuhn"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.65.0",
      "date": "2026-10-21T11:48:00.000Z",
      "distro": "resolute",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/856ba155f188fe7ea0036ae24f0eb8f55882f1826f7fb89d7f1f533bdc23fb56",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.65.0",
      "date": "2026-10-21T11:48:31.000Z",
      "distro": "resolute",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/ed32814e6dc94ecf97e6a0e5cf42cfb625987ffb2158991195f892d23b0e04b7",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.65.0",
      "date": "2026-10-21T11:47:06.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/2da4c9593edbabea875c113226f8be6bb08774fd062cd6c8fb8ca8eec8a467a5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.65.0",
      "date": "2026-10-21T11:47:04.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/39992be808ff9859cdc7e6084791903cd8415142f890174ce367a8b69600b024",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.65.0",
      "date": "2026-10-21T11:46:54.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/3f68b6fedff64513b742a18c17013bb6e45f5f3585a901eb72d51e49d5c92f99",
      "status": "success",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.65.0",
      "date": "2026-10-21T11:46:33.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/fd6b55a8902f42f780c2134ccdbb0ada90346b58a74e6ffdcb114fe5eaaaf483",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.65.0",
      "date": "2026-10-21T11:46:22.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/16dc7c31a4e734a3d0297d662e46b84f6cee7f3898b647bd58bb81c274af7e6f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.65.0",
      "date": "2026-10-21T11:46:11.000Z",
      "commit": "8a1dd4b219cc1615a73fcf691b99971a32fb390f",
      "fileid": "https://r2.ropensci.org/4615858ed91ca0eebd2ca30ab42107ef719cae177b9e495bff3fbe123d3cb023",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/39593946988"
    }
  ]
}