Overview | Creating an ExperimentHub Package or Converting to an ExperimentHub Package | ExperimentHub_docker
Package: ExperimentHubData 1.39.1
Bioconductor Package Maintainer
ExperimentHubData: Add resources to ExperimentHub
Functions to add metadata to ExperimentHub db and resource files to AWS S3 buckets.
Authors:
ExperimentHubData_1.39.1.tar.gz
ExperimentHubData_1.39.1.zip(r-4.7-any)ExperimentHubData_1.39.1.zip(r-4.6-any)ExperimentHubData_1.39.1.zip(r-4.5-any)
ExperimentHubData_1.39.1.tgz(r-4.6-any)ExperimentHubData_1.39.1.tgz(r-4.5-any)
ExperimentHubData_1.39.1.tar.gz(r-4.7-any)ExperimentHubData_1.39.1.tar.gz(r-4.6-any)
ExperimentHubData_1.39.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ExperimentHubData/json (API)
| # Install 'ExperimentHubData' in R: |
| install.packages('ExperimentHubData', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:ExperimentHubData-1.39.1(bioc 3.24)ExperimentHubData-1.38.0(bioc 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
infrastructuredataimportguithirdpartyclient
Last updated from:da56e77798. Checks:1 ERROR, 7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 175 | ||
| linux-devel | NOTE | 407 | ||
| source / vignettes | OK | 283 | ||
| linux-release | NOTE | 326 | ||
| macos-release | NOTE | 287 | ||
| macos-oldrel | NOTE | 283 | ||
| windows-devel | NOTE | 283 | ||
| windows-release | NOTE | 224 | ||
| windows-oldrel | NOTE | 243 | ||
| wasm-release | OK | 155 |
Exports:addResourcesExperimentHubMetadatamakeExperimentHubMetadata
Dependencies:AnnotationDbiAnnotationForgeAnnotationHubAnnotationHubDataaskpassBHBiobaseBiocBaseUtilsBiocCheckBiocFileCacheBiocGenericsBiocIOBiocManagerBiocParallelBiocVersionbiocViewsBiostringsbitbit64bitopsblobcachemcallrcigarilloclicodetoolscommonmarkcpp11crayoncurlDBIdbplyrdplyrevaluateExperimentHubfastmapfilelockformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesgluegraphhighrhttrhttr2IRangesjsonliteKEGGRESTknitrlambda.rlifecyclemagrittrmemoisemimeopensslOrganismDbiotelpillarpkgconfigpngprocessxpspurrrR6rappdirsRBGLRCurlrestfulrRhtslibrjsonrlangRsamtoolsRSQLitertracklayerRUnitrvestS4VectorsselectrSeqinfosnowstringdiststringistringrsystibbletidyrtidyselectUCSC.utilsutf8vctrswithrxfunXMLxml2XVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| addResources | addResources |
| Class ExperimentHubMetadata objects and methods | class:ExperimentHubMetadata ExperimentHubMetadata ExperimentHubMetadata-class show,ExperimentHubMetadata-method |
| Make ExperimentHubMetadata objects from csv file of metadata | makeExperimentHubMetadata |