Package: CellMapper 1.33.0

Brad Nelms

CellMapper: Predict genes expressed selectively in specific cell types

Infers cell type-specific expression based on co-expression similarity with known cell type marker genes. Can make accurate predictions using publicly available expression data, even when a cell type has not been isolated before.

Authors:Brad Nelms

CellMapper_1.33.0.tar.gz
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CellMapper.pdf |CellMapper.html✨
CellMapper/json (API)
NEWS

# Install 'CellMapper' in R:
install.packages('CellMapper', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On BioConductor:CellMapper-1.33.0(bioc 3.21)CellMapper-1.32.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarraysoftwaregeneexpression

3.95 score 15 scripts 182 downloads 3 mentions 5 exports 3 dependencies

Last updated 2 months agofrom:5a2c66b8c6. Checks:OK: 1 WARNING: 6. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 19 2024
R-4.5-winWARNINGDec 19 2024
R-4.5-linuxWARNINGDec 19 2024
R-4.4-winWARNINGDec 19 2024
R-4.4-macWARNINGDec 19 2024
R-4.3-winWARNINGDec 19 2024
R-4.3-macWARNINGDec 19 2024

Exports:CellMapperListCMprepCMsearchReplicateManuscriptshow

Dependencies:BiocGenericsgenericsS4Vectors

CellMapper Vignette

Rendered fromCellMapper.Rnwusingutils::Sweaveon Dec 19 2024.

Last update: 2018-08-29
Started: 2016-07-22