Introduction | Example of analysis | End of session
Package: CLLmethylation 1.33.0
Malgorzata Oles
CLLmethylation: Methylation data of primary CLL samples in PACE project
The package includes DNA methylation data for the primary Chronic Lymphocytic Leukemia samples included in the Primary Blood Cancer Encyclopedia (PACE) project. Raw data from the 450k DNA methylation arrays is stored in the European Genome-Phenome Archive (EGA) under accession number EGAS0000100174. For more information concerning the project please refer to the paper "Drug-perturbation-based stratification of blood cancer" by Dietrich S, Oles M, Lu J et al., J. Clin. Invest. (2018) and R/Bioconductor package BloodCancerMultiOmics2017.
Authors:
CLLmethylation_1.33.0.tar.gz
CLLmethylation_1.33.0.tar.gz(r-4.7-any)CLLmethylation_1.33.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
CLLmethylation/json (API)
| # Install 'CLLmethylation' in R: |
| install.packages('CLLmethylation', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:CLLmethylation-1.33.0(data/experiment 3.24)CLLmethylation-1.32.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimentdatadiseasemodelcancerdataleukemiacancerdatadatapkg
Last updated from:3b088a5dd8. Checks:1 ERROR, 2 NOTE, 1 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 157 | ||
| linux-devel | NOTE | 284 | ||
| source / vignettes | OK | 258 | ||
| linux-release | NOTE | 318 |
Exports:
Dependencies:abindAnnotationDbiAnnotationHubaskpassBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocManagerBiocVersionBiostringsbitbit64blobcachemclicpp11crayoncurlDBIdbplyrDelayedArraydigestdplyrExperimentHubfastmapfilelockgenericsGenomicRangesgluehttrhttr2IRangesjsonliteKEGGRESTlatticelifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpillarpkgconfigpngpurrrR6rappdirsrlangRSQLiteS4ArraysS4VectorsSeqinfoSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselectutf8vctrswithrXVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| DNA methylation data | meth |