{
  "_id": "6aca1758fe5cc25786e8491e",
  "Package": "CLLmethylation",
  "Title": "Methylation data of primary CLL samples in PACE project",
  "Version": "1.33.0",
  "Author": "Malgorzata Oles, Andreas Mock",
  "Maintainer": "Malgorzata Oles <dr.malgorzata.oles@gmail.com>, Andreas\nMock <andreas.mock@embl.de>",
  "Description": "The package includes DNA methylation data for the primary\nChronic Lymphocytic Leukemia samples included in the Primary\nBlood Cancer Encyclopedia (PACE) project. Raw data from the\n450k DNA methylation arrays is stored in the European\nGenome-Phenome Archive (EGA) under accession number\nEGAS0000100174. For more information concerning the project\nplease refer to the paper \"Drug-perturbation-based\nstratification of blood cancer\" by Dietrich S, Oles M, Lu J et\nal., J. Clin. Invest. (2018) and R/Bioconductor package\nBloodCancerMultiOmics2017.",
  "Encoding": "UTF-8",
  "VignetteBuilder": "knitr",
  "License": "LGPL",
  "biocViews": "ExperimentData, DiseaseModel, CancerData, LeukemiaCancerData",
  "Config/pak/sysreqs": "libicu-dev libpng-dev libssl-dev zlib1g-dev",
  "Repository": "https://bioc.r-universe.dev",
  "Date/Publication": "2026-04-28 12:31:08 UTC",
  "RemoteUrl": "https://github.com/bioc/CLLmethylation",
  "RemoteRef": "HEAD",
  "RemoteSha": "3b088a5dd8d50b51a078f92717c57fbfc540e1f7",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-10 10:39:32 UTC",
    "User": "root"
  },
  "_user": "bioc",
  "_type": "src",
  "_file": "CLLmethylation_1.33.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/45cc3cdf5ae5e4f869186389ae3a6d3e85e6cca8d988bba3d49dea5544276bfd",
  "_filesize": 160191,
  "_sha256": "45cc3cdf5ae5e4f869186389ae3a6d3e85e6cca8d988bba3d49dea5544276bfd",
  "_expires": "2027-01-18T10:45:42.000Z",
  "_created": "2026-10-10T10:39:32.000Z",
  "_published": "2026-10-10T10:45:44.005Z",
  "_buildurl": "https://github.com/r-universe/bioc/actions/runs/38045427040",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_bioccheck": {
    "error": 1,
    "warning": 1,
    "note": 6
  },
  "_upstream": "https://github.com/bioc/CLLmethylation",
  "_commit": {
    "id": "3b088a5dd8d50b51a078f92717c57fbfc540e1f7",
    "author": "lshep <lori.shepherd@roswellpark.org>",
    "committer": "lshep <lori.shepherd@roswellpark.org>",
    "message": "bump x.y.z version to odd y following creation of RELEASE_3_23 branch\n",
    "time": 1777379468
  },
  "_maintainer": {
    "name": "Malgorzata Oles",
    "email": "andreas.mock@embl.de",
    "login": "malgorzataoles",
    "orcid": "0000-0002-1520-1054",
    "description": "Bioinformatics Scientist",
    "uuid": 9365360
  },
  "_distro": "resolute",
  "_jobs": [
    {
      "job": 114194653842,
      "time": 199,
      "config": "bioc-checks",
      "r": "4.6.1",
      "check": "ERROR",
      "artifact": "11666843485"
    },
    {
      "job": 114194653817,
      "time": 275,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11667443949"
    },
    {
      "job": 114194653804,
      "time": 313,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11666648739"
    },
    {
      "job": 114193926279,
      "time": 259,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11667338713"
    }
  ],
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "SummarizedExperiment",
      "role": "Imports"
    },
    {
      "package": "ExperimentHub",
      "role": "Imports"
    },
    {
      "package": "BiocStyle",
      "role": "Suggests"
    },
    {
      "package": "ggplot2",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "bioc",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2026-18",
      "n": 2
    }
  ],
  "_tags": [],
  "_bioc": [
    {
      "branch": "devel",
      "version": "1.33.0",
      "bioc": "3.24",
      "repository": "data/experiment"
    },
    {
      "branch": "release",
      "version": "1.32.0",
      "bioc": "3.23",
      "repository": "data/experiment"
    }
  ],
  "_topics": [
    "experimentdata",
    "diseasemodel",
    "cancerdata",
    "leukemiacancerdata",
    "datapkg"
  ],
  "_userbio": {
    "uuid": 2286807,
    "type": "organization",
    "name": "Bioconductor",
    "followers": 476,
    "description": "Software for the analysis and comprehension of high-throughput genomic data"
  },
  "_searchresults": 0,
  "_datapkg": true,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/CLLmethylation.html",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md"
  ],
  "_cranurl": false,
  "_exports": [],
  "_help": [
    {
      "page": "data-meth",
      "title": "DNA methylation data",
      "topics": [
        "meth"
      ]
    }
  ],
  "_readme": "https://github.com/bioc/CLLmethylation/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "AnnotationDbi",
    "AnnotationHub",
    "askpass",
    "Biobase",
    "BiocBaseUtils",
    "BiocFileCache",
    "BiocGenerics",
    "BiocManager",
    "BiocVersion",
    "Biostrings",
    "bit",
    "bit64",
    "blob",
    "cachem",
    "cli",
    "cpp11",
    "crayon",
    "curl",
    "DBI",
    "dbplyr",
    "DelayedArray",
    "dplyr",
    "ExperimentHub",
    "fastmap",
    "filelock",
    "generics",
    "GenomicRanges",
    "glue",
    "httr",
    "httr2",
    "IRanges",
    "jsonlite",
    "KEGGREST",
    "lattice",
    "lifecycle",
    "magrittr",
    "Matrix",
    "MatrixGenerics",
    "matrixStats",
    "memoise",
    "mime",
    "openssl",
    "pillar",
    "pkgconfig",
    "png",
    "purrr",
    "R6",
    "rappdirs",
    "rlang",
    "RSQLite",
    "S4Arrays",
    "S4Vectors",
    "Seqinfo",
    "SparseArray",
    "stringi",
    "stringr",
    "SummarizedExperiment",
    "sys",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "withr",
    "XVector",
    "yaml"
  ],
  "_vignettes": [
    {
      "source": "CLLmethylation.Rmd",
      "filename": "CLLmethylation.html",
      "title": "CLLmethylation",
      "author": "Małgorzata Oleś",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Example of analysis",
        "End of session"
      ],
      "created": "2018-02-06 11:24:25",
      "modified": "2018-02-06 12:13:00",
      "commits": 2
    }
  ],
  "_score": 4,
  "_indexed": true,
  "_nocasepkg": "cllmethylation",
  "_universes": [
    "bioc",
    "malgorzataoles"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.33.0",
      "date": "2026-10-10T10:43:15.000Z",
      "distro": "resolute",
      "commit": "3b088a5dd8d50b51a078f92717c57fbfc540e1f7",
      "fileid": "https://r2.ropensci.org/e6bc6142ce5bbfad73831a62e9e50a5bdace57f2ff82d1ef849e2d765004561c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045427040"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.33.0",
      "date": "2026-10-10T10:43:49.000Z",
      "distro": "resolute",
      "commit": "3b088a5dd8d50b51a078f92717c57fbfc540e1f7",
      "fileid": "https://r2.ropensci.org/ebfaaaea33fdaca7664d680ba37efdac21dcc69bb03e3c3daf4089d18a429818",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/bioc/actions/runs/38045427040"
    }
  ]
}