Package: BufferedMatrixMethods 1.71.1

Ben Bolstad

BufferedMatrixMethods: Microarray Data related methods that utlize BufferedMatrix objects

Microarray analysis methods that use BufferedMatrix objects

Authors:Ben Bolstad <[email protected]>

BufferedMatrixMethods_1.71.1.tar.gz
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BufferedMatrixMethods.pdf |BufferedMatrixMethods.html
BufferedMatrixMethods/json (API)

# Install 'BufferedMatrixMethods' in R:
install.packages('BufferedMatrixMethods', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:BufferedMatrixMethods-1.71.1(bioc 3.21)BufferedMatrixMethods-1.70.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

infrastructure

2.95 score 336 downloads 3 mentions 7 exports 1 dependencies

Last updated 2 months agofrom:15eb98812d. Checks:1 OK, 10 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 13 2025
R-4.5-win-x86_64NOTEFeb 13 2025
R-4.5-mac-x86_64NOTEFeb 13 2025
R-4.5-mac-aarch64NOTEFeb 13 2025
R-4.5-linux-x86_64NOTEFeb 13 2025
R-4.4-win-x86_64NOTEFeb 13 2025
R-4.4-mac-x86_64NOTEFeb 13 2025
R-4.4-mac-aarch64NOTEFeb 13 2025
R-4.3-win-x86_64NOTEFeb 13 2025
R-4.3-mac-x86_64NOTEFeb 13 2025
R-4.3-mac-aarch64NOTEFeb 13 2025

Exports:bg.correct.BufferedMatrixBufferedMatrix.bg.correct.normalize.quantilesBufferedMatrix.justRMABufferedMatrix.read.celfilesBufferedMatrix.read.probematrixmedian.polish.summarizenormalize.BufferedMatrix.quantiles

Dependencies:BufferedMatrix

Readme and manuals

Help Manual

Help pageTopics
Use BufferedMatrix objects to facilitate RMA computation with low memory overheadBufferedMatrix.justRMA
Read CEL file data into PM or MM BufferedMatrixBufferedMatrix.read.celfiles
Read CEL file data into PM or MM BufferedMatrixBufferedMatrix.read.probematrix
RMA preprocessing functions that work on BufferedMatrix objectsbg.correct.BufferedMatrix BufferedMatrix.bg.correct.normalize.quantiles median.polish.summarize median.polish.summarize,BufferedMatrix-method normalize.BufferedMatrix.quantiles