Package: BridgeDbR 2.15.0

Egon Willighagen

BridgeDbR: Code for using BridgeDb identifier mapping framework from within R

Use BridgeDb functions and load identifier mapping databases in R. It uses GitHub, Zenodo, and Figshare if you use this package to download identifier mappings files.

Authors:Christ Leemans <[email protected]>, Egon Willighagen <[email protected]>, Denise Slenter, Anwesha Bohler <[email protected]>, Lars Eijssen <[email protected]>, Tooba Abbassi-Daloii

BridgeDbR_2.15.0.tar.gz
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BridgeDbR.pdf |BridgeDbR.html✨
BridgeDbR/json (API)
NEWS

# Install 'BridgeDbR' in R:
install.packages('BridgeDbR', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/bridgedb/bridgedbr/issues

Uses libs:
  • openjdk– OpenJDK Java runtime, using Hotspot JIT

On BioConductor:BridgeDbR-2.15.0(bioc 3.20)BridgeDbR-2.14.0(bioc 3.19)

bioconductor-package

16 exports 1.31 score 2 dependencies 4 mentions

Last updated 2 months agofrom:cad74c2382

Exports:fullNameExistsgetAttributesgetBridgeNamesgetDatabasegetDataSourcegetFullNamegetMatchingSourcesgetOrganismCodegetPropertiesgetSystemCodeloadDatabasemapmapsregisterDataSourcesystemCodeExistsxrefExists

Dependencies:curlrJava

BridgeDbR Tutorial

Egon Willighagen

Rendered fromtutorial.Rmdusingknitr::rmarkdownon Jun 22 2024.

Last update: 2023-09-09
Started: 2018-03-10