Package: ArrayExpress 1.73.0

Jose Marugan

ArrayExpress: Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet.

Authors:Audrey Kauffmann, Ibrahim Emam, Michael Schubert, Jose Marugan

# Install 'ArrayExpress' in R:

install.packages('ArrayExpress', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

Last updated from:59e252288e. Checks:1 ERROR, 9 OK. Indexed: yes.

Target	Result	Time
bioc-checks	ERROR	169
linux-devel-x86_64	OK	453
source / vignettes	OK	344
linux-release-x86_64	OK	495
macos-release-arm64	OK	404
macos-oldrel-arm64	OK	369
windows-devel	OK	390
windows-release	OK	326
windows-oldrel	OK	406
wasm-release	OK	112

Last update: 2023-03-16
Started: 2013-11-01

Help page	Topics
Convert MAGE-TAB files from raw data into a Bioconductor object	ae2bioc
R objects from ArrayExpress collection	ArrayExpress
Unzip archives in a specified directory	extract.zip
Download MAGE-TAB files from the ArrayExpress collection in a specified directory	getAE
Return the possible column names from processed MAGE-TAB files	getcolproc
Return the possible column names from raw MAGE-TAB files	getcolraw
Convert processed MAGE-TAB files into a Bioconductor object	procset
Query of the ArrayExpress collection in Biostudies	queryAE