Package: ArrayExpress 1.65.0

Jose Marugan

ArrayExpress: Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet.

Authors:Audrey Kauffmann, Ibrahim Emam, Michael Schubert, Jose Marugan

ArrayExpress_1.65.0.tar.gz
ArrayExpress_1.65.0.zip(r-4.5)ArrayExpress_1.65.0.zip(r-4.4)ArrayExpress_1.65.0.zip(r-4.3)
ArrayExpress_1.65.0.tgz(r-4.4-any)ArrayExpress_1.65.0.tgz(r-4.3-any)
ArrayExpress_1.65.0.tar.gz(r-4.5-noble)ArrayExpress_1.65.0.tar.gz(r-4.4-noble)
ArrayExpress_1.65.0.tgz(r-4.4-emscripten)ArrayExpress_1.65.0.tgz(r-4.3-emscripten)
ArrayExpress.pdf |ArrayExpress.html
ArrayExpress/json (API)
NEWS

# Install 'ArrayExpress' in R:
install.packages('ArrayExpress', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On BioConductor:ArrayExpress-1.65.0(bioc 3.20)ArrayExpress-1.64.0(bioc 3.19)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarraydataimportonechanneltwochannel

8 exports 5.85 score 57 dependencies 1 dependents 2.0k mentions 118 scripts 860 downloads

Last updated 5 months agofrom:a6cc96b596. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 03 2024
R-4.5-winOKOct 03 2024
R-4.5-linuxOKOct 03 2024
R-4.4-winOKOct 03 2024
R-4.4-macOKOct 03 2024
R-4.3-winOKOct 03 2024
R-4.3-macOKOct 03 2024

Exports:ae2biocArrayExpressextract.zipgetAEgetcolprocgetcolrawprocsetqueryAE

Dependencies:abindaffxparseraffyioaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicodetoolscpp11crayoncurlDBIDelayedArrayfastmapffforeachGenomeInfoDbGenomeInfoDbDataGenomicRangesgluehttrIRangesiteratorsjsonlitelatticelifecyclelimmaMatrixMatrixGenericsmatrixStatsmemoisemimeoligooligoClassesopensslpkgconfigplogrpreprocessCoreR6rlangRSQLiteS4ArraysS4VectorsSparseArraystatmodSummarizedExperimentsysUCSC.utilsvctrsXVectorzlibbioc

ArrayExpress: Import and convert ArrayExpress data sets into R object

Rendered fromArrayExpress.Rnwusingutils::Sweaveon Oct 03 2024.

Last update: 2023-03-16
Started: 2013-11-01