Package: ArrayExpress 1.73.0

Jose Marugan

ArrayExpress: Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet.

Authors:Audrey Kauffmann, Ibrahim Emam, Michael Schubert, Jose Marugan

ArrayExpress_1.73.0.tar.gz
ArrayExpress_1.73.0.zip(r-4.7)ArrayExpress_1.73.0.zip(r-4.6)ArrayExpress_1.73.0.zip(r-4.5)
ArrayExpress_1.73.0.tgz(r-4.6-any)ArrayExpress_1.73.0.tgz(r-4.5-any)
ArrayExpress_1.73.0.tar.gz(r-4.7-any)ArrayExpress_1.73.0.tar.gz(r-4.6-any)
ArrayExpress_1.73.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
ArrayExpress/json (API)
NEWS

# Install 'ArrayExpress' in R:
install.packages('ArrayExpress', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

On BioConductor:ArrayExpress-1.73.0(bioc 3.24)ArrayExpress-1.72.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

microarraydataimportonechanneltwochannel

6.04 score 1 packages 183 scripts 884 downloads 2.0k mentions 8 exports 54 dependencies

Last updated from:59e252288e. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR169
linux-devel-x86_64OK453
source / vignettesOK344
linux-release-x86_64OK495
macos-release-arm64OK404
macos-oldrel-arm64OK369
windows-develOK390
windows-releaseOK326
windows-oldrelOK406
wasm-releaseOK112

Exports:ae2biocArrayExpressextract.zipgetAEgetcolprocgetcolrawprocsetqueryAE

Dependencies:abindaffxparseraffyioaskpassBiobaseBiocGenericsBiocManagerBiostringsbitbit64blobcachemclicodetoolscpp11crayoncurlDBIDelayedArrayfastmapffforeachgenericsGenomicRangesgluehttrIRangesiteratorsjsonlitelatticelifecyclelimmaMatrixMatrixGenericsmatrixStatsmemoisemimeoligooligoClassesopensslpkgconfigpreprocessCoreR6rlangRSQLiteS4ArraysS4VectorsSeqinfoSparseArraystatmodSummarizedExperimentsysvctrsXVector

ArrayExpress: Import and convert ArrayExpress data sets into R object

Rendered fromArrayExpress.Rnwusingutils::Sweaveon May 31 2026.

Last update: 2023-03-16
Started: 2013-11-01