Inferential replicate data moved to Zenodo | Sample information and quantification files | Genome and gene annotation file | Cufflinks | RSEM | kallisto | Salmon | alevin | oarfish | Sailfish | Session info
Package: tximportData 1.41.1
Michael Love
tximportData: tximportData
This package provides the output of running various transcript abundance quantifiers on a set of 2 RNA-seq samples from the GEUVADIS project. The quantifiers were Cufflinks, RSEM, kallisto, Salmon and Sailfish. alevin example output is also included. Inferential replicate data from earlier versions is archived at <doi:10.5281/zenodo.22982575>. For details on version numbers, sample information, and details on calls, see the package vignette.
Authors:
tximportData_1.41.1.tar.gz
tximportData_1.41.1.tar.gz(r-4.7-any)tximportData_1.41.1.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
tximportData/json (API)
| # Install 'tximportData' in R: |
| install.packages('tximportData', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:tximportData-1.41.1(data/experiment 3.24)tximportData-1.40.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimentdatasequencingdatarnaseqdatadatapkg
Last updated from:59766ff72a. Checks:1 ERROR, 3 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | ERROR | 115 | ||
| linux-devel | OK | 165 | ||
| source / vignettes | OK | 202 | ||
| linux-release | OK | 218 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
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