Package: tripr 1.11.0
tripr: T-cell Receptor/Immunoglobulin Profiler (TRIP)
TRIP is a software framework that provides analytics services on antigen receptor (B cell receptor immunoglobulin, BcR IG | T cell receptor, TR) gene sequence data. It is a web application written in R Shiny. It takes as input the output files of the IMGT/HighV-Quest tool. Users can select to analyze the data from each of the input samples separately, or the combined data files from all samples and visualize the results accordingly.
Authors:
tripr_1.11.0.tar.gz
tripr_1.11.0.zip(r-4.5)tripr_1.11.0.zip(r-4.4)tripr_1.11.0.zip(r-4.3)
tripr_1.11.0.tgz(r-4.4-any)tripr_1.11.0.tgz(r-4.3-any)
tripr_1.11.0.tar.gz(r-4.5-noble)tripr_1.11.0.tar.gz(r-4.4-noble)
tripr_1.11.0.tgz(r-4.4-emscripten)tripr_1.11.0.tgz(r-4.3-emscripten)
tripr.pdf |tripr.html✨
tripr/json (API)
NEWS
# Install 'tripr' in R: |
install.packages('tripr', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/biodataanalysisgroup/tripr/issues
On BioConductor:tripr-1.11.0(bioc 3.20)tripr-1.10.0(bioc 3.19)
Last updated 2 months agofrom:32a5a993ca
Dependencies:askpassattemptbase64encbslibcachemclicolorspacecommonmarkconfigcpp11crayoncrosstalkcurldata.tabledigestdplyrDTevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegolemgridExtragtableherehighrhtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemisc3dmunsellnlmeopensslpillarpkgconfigplot3DplotlyplyrpromisespurrrR6rappdirsRColorBrewerRcpprlangrmarkdownrprojrootsassscalesshinyshinyBSshinyFilesshinyjssourcetoolsstringdiststringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunxtableyaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Run the Shiny Application | run_app |
Run tripr analysis via R command line | run_TRIP |
tripr | tripr |