Package: tripr 1.19.0

Nikolaos Pechlivanis

tripr: T-cell Receptor/Immunoglobulin Profiler (TRIP)

TRIP is a software framework that provides analytics services on antigen receptor (B cell receptor immunoglobulin, BcR IG | T cell receptor, TR) gene sequence data. It is a web application written in R Shiny. It takes as input the output files of the IMGT/HighV-Quest tool. Users can select to analyze the data from each of the input samples separately, or the combined data files from all samples and visualize the results accordingly.

Authors:Maria Th. Kotouza [aut], Katerina Gemenetzi [aut], Chrysi Galigalidou [aut], Elisavet Vlachonikola [aut], Nikolaos Pechlivanis [cre], Andreas Agathangelidis [aut], Raphael Sandaltzopoulos [aut], Pericles A. Mitkas [aut], Kostas Stamatopoulos [aut], Anastasia Chatzidimitriou [aut], Fotis E. Psomopoulos [aut], Iason Ofeidis [aut], Aspasia Orfanou [aut]

tripr_1.19.0.tar.gz
tripr_1.19.0.zip(r-4.7)tripr_1.19.0.zip(r-4.6)tripr_1.19.0.zip(r-4.5)
tripr_1.19.0.tgz(r-4.6-any)tripr_1.19.0.tgz(r-4.5-any)
tripr_1.19.0.tar.gz(r-4.7-any)tripr_1.19.0.tar.gz(r-4.6-any)
tripr_1.19.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
tripr/json (API)

# Install 'tripr' in R:

install.packages('tripr', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/biodataanalysisgroup/tripr/issues

On BioConductor:tripr-1.19.0(bioc 3.24)tripr-1.18.0(bioc 3.23)

batcheffect multiplecomparison geneexpression immunooncology targetedresequencing bioconductor clonotype

5.56 score 3 stars 6 scripts 2 exports 90 dependencies

Last updated from:1f6f082d7a. Checks:8 WARNING, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	WARNING	258
linux-devel-x86_64	WARNING	371
source / vignettes	OK	369
linux-release-x86_64	WARNING	430
macos-release-arm64	WARNING	158
macos-oldrel-arm64	WARNING	152
windows-devel	WARNING	227
windows-release	WARNING	206
windows-oldrel	WARNING	210
wasm-release	OK	222