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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "tripr" in publications use:'
type: software
license: MIT
title: 'tripr: T-cell Receptor/Immunoglobulin Profiler (TRIP)'
version: 1.11.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.tripr
abstract: TRIP is a software framework that provides analytics services on antigen
  receptor (B cell receptor immunoglobulin, BcR IG | T cell receptor, TR) gene sequence
  data. It is a web application written in R Shiny. It takes as input the output files
  of the IMGT/HighV-Quest tool. Users can select to analyze the data from each of
  the input samples separately, or the combined data files from all samples and visualize
  the results accordingly.
authors:
- family-names: Kotouza
  given-names: Maria Th.
- family-names: Gemenetzi
  given-names: Katerina
- family-names: Galigalidou
  given-names: Chrysi
- family-names: Vlachonikola
  given-names: Elisavet
- family-names: Pechlivanis
  given-names: Nikolaos
  email: inab.bioinformatics@lists.certh.gr
- family-names: Agathangelidis
  given-names: Andreas
- family-names: Sandaltzopoulos
  given-names: Raphael
- family-names: Mitkas
  given-names: Pericles A.
- family-names: Stamatopoulos
  given-names: Kostas
- family-names: Chatzidimitriou
  given-names: Anastasia
- family-names: Psomopoulos
  given-names: Fotis E.
- family-names: Ofeidis
  given-names: Iason
- family-names: Orfanou
  given-names: Aspasia
preferred-citation:
  type: article
  title: T-cell Receptor/Immunoglobulin Profiler (TRIP)
  authors:
  - family-names: Kotouza
    given-names: Maria Th.
  - family-names: Gemenetzi
    given-names: Katerina
  - family-names: Galigalidou
    given-names: Chrysi
  - family-names: Vlachonikola
    given-names: Elisavet
  - family-names: Pechlivanis
    given-names: Nikolaos
    email: inab.bioinformatics@lists.certh.gr
  - family-names: Agathangelidis
    given-names: Andreas
  - family-names: Sandaltzopoulos
    given-names: Raphael
  - family-names: Mitkas
    given-names: Pericles A.
  - family-names: Stamatopoulos
    given-names: Kostas
  - family-names: Chatzidimitriou
    given-names: Anastasia
  - family-names: Psomopoulos
    given-names: Fotis E.
  journal: BMC Bioinformatics
  year: '2020'
  volume: '21'
  issue: '422'
  url: https://doi.org/10.1186/s12859-020-03669-1
  start: '-'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/BiodataAnalysisGroup/tripr
commit: 32a5a993cac0f677826033decfc256873f8445af
url: https://github.com/BiodataAnalysisGroup/tripr
contact:
- family-names: Pechlivanis
  given-names: Nikolaos
  email: inab.bioinformatics@lists.certh.gr