Package: tissueTreg 1.33.0
Charles Imbusch
tissueTreg: TWGBS and RNA-seq data from tissue T regulatory cells from mice
The package provides ready to use epigenomes (obtained from TWGBS) and transcriptomes (RNA-seq) from various tissues as obtained in the study (Delacher and Imbusch 2017, PMID: 28783152). Regulatory T cells (Treg cells) perform two distinct functions: they maintain self-tolerance, and they support organ homeostasis by differentiating into specialized tissue Treg cells. The underlying dataset characterises the epigenetic and transcriptomic modifications for specialized tissue Treg cells.
Authors:
tissueTreg_1.33.0.tar.gz
tissueTreg_1.33.0.tar.gz(r-4.7-any)tissueTreg_1.33.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
tissueTreg/json (API)
| # Install 'tissueTreg' in R: |
| install.packages('tissueTreg', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/cimbusch/tissuetreg/issues
On BioConductor:tissueTreg-1.33.0(data/experiment 3.24)tissueTreg-1.32.0(data/experiment 3.23)
experimentdatatissuemus_musculus_datasequencingdatarnaseqdatadatapkg
Last updated from:c89d03bfcd. Checks:1 WARNING, 3 ERROR. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 171 | ||
| linux-devel | ERROR | 277 | ||
| source / vignettes | ERROR | 353 | ||
| linux-release | ERROR | 211 |
Exports:
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Epigenomes and transcriptomes of tissue resident regulatory T cells | tissueTreg |