Package: tidyprint 1.1.0

Chen Zhan

tidyprint: Custom Print Methods for SummarizedExperiment

Provides customized print methods for 'SummarizedExperiment' objects to enhance readability and usability within a tidy workflow. It offers consistent, tidyverse-aligned console displays, including alternative tibble abstractions for large genomic data to improve discoverability and interpretation. The package also includes unified, contextual messaging utilities intended for the 'tidyomics' ecosystem.

Authors:Chen Zhan [aut, cre]

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manual.pdf |manual.html✨
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tidyprint/json (API)
NEWS

# Install 'tidyprint' in R:

install.packages('tidyprint', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tidyomics/tidyprint/issues

Datasets:

se_airway - Example SummarizedExperiment dataset

On BioConductor:tidyprint-1.1.0(bioc 3.24)tidyprint-1.0.0(bioc 3.23)

software visualization infrastructure

5.43 score 2 stars 17 scripts 174 downloads 5 exports 37 dependencies

Last updated from:9177293cac. Checks:8 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
bioc-checks	NOTE	214
linux-devel-x86_64	NOTE	288
source / vignettes	OK	277
linux-release-x86_64	NOTE	368
macos-release-arm64	NOTE	203
macos-oldrel-arm64	NOTE	180
windows-devel	NOTE	851
windows-release	NOTE	751
windows-oldrel	NOTE	806
wasm-release	OK	184

Exports:demo_tidy_message tidy_message tidy_print_enabled tidy_print_off tidy_print_on

Dependencies:abind Biobase BiocGenerics cli cpp11 DelayedArray dplyr fansi generics GenomicRanges glue IRanges lattice lifecycle magrittr Matrix MatrixGenerics matrixStats pillar pkgconfig purrr R6 rlang S4Arrays S4Vectors Seqinfo SparseArray stringi stringr SummarizedExperiment tibble tidyr tidyselect utf8 vctrs withr XVector

tidyprint

Rendered fromIntroduction.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2026-01-07
Started: 2025-02-14

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
tidyprint: Custom Print Methods for SummarizedExperiment	tidyprint-package tidyprint
Convert SummarizedExperiment to tibble	as_tibble.SummarizedExperiment
Demonstrate tidy_message usage	demo_tidy_message
Format covariate header by distributing label across covariate columns	format_covariate_header
Print method for SummarizedExperiment with tidyprint styles	print.SummarizedExperiment
Example SummarizedExperiment dataset	se_airway
Custom header for SE_print_abstraction	tbl_format_header.SE_print_abstraction
Print a styled tidyprint message	tidy_message
Enable or disable tidy print for SummarizedExperiment objects	tidy_print_enabled tidy_print_off tidy_print_on tidy_print_toggle