Package: seqcombo 1.35.0

Guangchuang Yu

seqcombo: Visualization Tool for Genetic Reassortment

Provides useful functions for visualizing virus reassortment events.

Authors:Guangchuang Yu [aut, cre]

seqcombo_1.35.0.tar.gz
seqcombo_1.35.0.zip(r-4.7)seqcombo_1.35.0.zip(r-4.6)seqcombo_1.35.0.zip(r-4.5)
seqcombo_1.35.0.tgz(r-4.6-any)seqcombo_1.35.0.tgz(r-4.5-any)
seqcombo_1.35.0.tar.gz(r-4.7-any)seqcombo_1.35.0.tar.gz(r-4.6-any)
seqcombo_1.35.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
seqcombo/json (API)
NEWS

# Install 'seqcombo' in R:
install.packages('seqcombo', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/guangchuangyu/seqcombo/issues

On BioConductor:seqcombo-1.35.0(bioc 3.24)seqcombo-1.34.0(bioc 3.23)

alignmentsoftwarevisualization

5.92 score 21 stars 8 scripts 369 downloads 4 exports 26 dependencies

Last updated from:e2a7d31e4b. Checks:1 ERROR, 9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR151
linux-devel-x86_64OK226
source / vignettesOK187
linux-release-x86_64OK173
macos-release-arm64OK95
macos-oldrel-arm64OK95
windows-develOK423
windows-releaseOK89
windows-oldrelOK362
wasm-releaseOK118

Exports:geom_genotypegeom_hybridhybrid_plotset_layout

Dependencies:clicpp11digestfarverfsggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMatrixpkgconfigR6rappdirsRColorBrewerrlangS7scalesvctrsviridisLitewithryulab.utils

seqcombo for visualizing genetic reassortment

Guangchuang Yu School of Basic Medical Sciences, Southern Medical University

Rendered fromseqcombo.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2021-12-15
Started: 2016-11-17

Readme and manuals

Help Manual

Help pageTopics
geom_genotypegeom_genotype
geom_hybridgeom_hybrid
hyrid_plothybrid_plot
set_layoutset_layout