Package: seqcombo 1.29.0

Guangchuang Yu

seqcombo: Visualization Tool for Genetic Reassortment

Provides useful functions for visualizing virus reassortment events.

Authors:Guangchuang Yu [aut, cre]

seqcombo_1.29.0.tar.gz
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seqcombo.pdf |seqcombo.html
seqcombo/json (API)
NEWS

# Install 'seqcombo' in R:
install.packages('seqcombo', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/guangchuangyu/seqcombo/issues

On BioConductor:seqcombo-1.29.0(bioc 3.21)seqcombo-1.28.0(bioc 3.20)

alignmentsoftwarevisualization

6.10 score 21 stars 4 scripts 175 downloads 4 exports 33 dependencies

Last updated 2 months agofrom:10d9bfcab6. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKDec 19 2024
R-4.5-winOKDec 19 2024
R-4.5-linuxOKDec 19 2024
R-4.4-winOKDec 19 2024
R-4.4-macOKDec 19 2024
R-4.3-winOKDec 19 2024
R-4.3-macOKDec 19 2024

Exports:geom_genotypegeom_hybridhybrid_plotset_layout

Dependencies:clicolorspacecpp11digestfansifarverfsggplot2gluegtableigraphisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerrlangscalestibbleutf8vctrsviridisLitewithryulab.utils

seqcombo for visualizing genetic reassortment

Rendered fromseqcombo.Rmdusingknitr::rmarkdownon Dec 19 2024.

Last update: 2021-12-15
Started: 2016-11-17

Readme and manuals

Help Manual

Help pageTopics
geom_genotypegeom_genotype
geom_hybridgeom_hybrid
hyrid_plothybrid_plot
set_layoutset_layout