Introduction | Finding datasets | Loading a dataset | Adding new datasets | Session information
Package: scRNAseq 2.27.0
Aaron Lun
scRNAseq: Collection of Public Single-Cell RNA-Seq Datasets
Gene-level counts for a collection of public scRNA-seq datasets, provided as SingleCellExperiment objects with cell- and gene-level metadata.
Authors:
scRNAseq_2.27.0.tar.gz
scRNAseq_2.27.0.tar.gz(r-4.7-any)scRNAseq_2.27.0.tar.gz(r-4.6-any)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
scRNAseq/json (API)
| # Install 'scRNAseq' in R: |
| install.packages('scRNAseq', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:scRNAseq-2.27.0(data/experiment 3.24)scRNAseq-2.26.0(data/experiment 3.23)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
experimenthubexperimentdataexpressiondatasequencingdatarnaseqdatasinglecelldatadatapkg
Last updated from:8f1f471b35. Checks:1 WARNING, 2 NOTE, 1 OK. Indexed: yes.
This is a data package. Data packages may be large and do not get checked across all platforms.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| bioc-checks | WARNING | 173 | ||
| linux-devel | NOTE | 1242 | ||
| source / vignettes | OK | 300 | ||
| linux-release | NOTE | 1243 |
Exports:AztekinTailDataBacherTCellDataBachMammaryDataBaronPancreasDataBhaduriOrganoidDataBuettnerESCDataBunisHSPCDataCampbellBrainDataChenBrainDatacountErccMoleculesDarmanisBrainDatadefineTextQueryERCCSpikeInConcentrationsErnstSpermatogenesisDatafetchDatasetfetchLatestVersionfetchMetadataFletcherOlfactoryDataGiladiHSCDataGrunHSCDataGrunPancreasDatagscHeOrganAtlasDataHermannSpermatogenesisDataHuCortexDataJessaBrainDataKolodziejczykESCDataKotliarovPBMCDataLaMannoBrainDataLawlorPancreasDataLedergorMyelomaDataLengESCDatalistDatasetslistPathslistVersionsLunSpikeInDataMacoskoRetinaDataMairPBMCDataMarquesBrainDataMessmerESCDataMuraroPancreasDataNestorowaHSCDataNowakowskiCortexDataPaulHSCDatapolishDatasetPollenGliaDataReprocessedAllenDataReprocessedFluidigmDataReprocessedTh2DataRichardTCellDataRomanovBrainDatasaveDatasetsearchDatasetsSegerstolpePancreasDataShekharRetinaDataStoeckiusHashingDatasurveyDatasetsTasicBrainDataUsoskinBrainDataWuKidneyDataXinPancreasDataZeiselBrainDataZeiselNervousDataZhaoImmuneLiverDataZhongPrefrontalDataZilionisLungData
Dependencies:abindalabaster.basealabaster.matrixalabaster.rangesalabaster.scealabaster.schemasalabaster.seAnnotationDbiAnnotationFilterAnnotationHubaskpassassortheadBHBiobaseBiocBaseUtilsBiocFileCacheBiocGenericsBiocIObiocmakeBiocManagerBiocParallelBiocVersionBiostringsbitbit64bitopsblobcachemcigarilloclicodetoolscpp11crayoncurlDBIdbplyrDelayedArraydir.expirydplyrensembldbExperimentHubfastmapfilelockformatRfutile.loggerfutile.optionsgenericsGenomeInfoDbGenomicAlignmentsGenomicFeaturesGenomicRangesgluegypsumh5mreadHDF5Arrayhttrhttr2IRangesjsonlitejsonvalidateKEGGRESTlambda.rlatticelazyevallifecyclemagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpillarpkgconfigpngProtGenericspurrrR6rappdirsRcppRCurlrestfulrrhdf5rhdf5filtersRhdf5libRhtslibrjsonrlangRsamtoolsRSQLitertracklayerS4ArraysS4VectorsSeqinfoSingleCellExperimentsnowSparseArraystringistringrSummarizedExperimentsystibbletidyrtidyselectUCSC.utilsutf8V8vctrswithrXMLXVectoryaml
