Package: rSWeeP 1.17.0
Danrley R. Fernandes
rSWeeP: Functions to creation of low dimensional comparative matrices of Amino Acid Sequence occurrences
The SWeeP method was developed to favor the analizes between amino acids sequences and to assist alignment free phylogenetic studies. This method is based on the concept of sparse words, which is applied in the scan of biological sequences and its the conversion in a matrix of ocurrences. Aiming the generation of low dimensional matrices of Amino Acid Sequence occurrences.
Authors:
rSWeeP_1.17.0.tar.gz
rSWeeP_1.17.0.zip(r-4.5)rSWeeP_1.17.0.zip(r-4.4)rSWeeP_1.17.0.zip(r-4.3)
rSWeeP_1.17.0.tgz(r-4.4-any)rSWeeP_1.17.0.tgz(r-4.3-any)
rSWeeP_1.17.0.tar.gz(r-4.5-noble)rSWeeP_1.17.0.tar.gz(r-4.4-noble)
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rSWeeP.pdf |rSWeeP.html✨
rSWeeP/json (API)
NEWS
| # Install 'rSWeeP' in R: |
| install.packages('rSWeeP', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org')) |
On BioConductor:rSWeeP-1.17.0(bioc 3.20)rSWeeP-1.16.0(bioc 3.19)
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 2 months agofrom:2437a5bc3a
Dependencies:pracma
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Generate a orthonormal matrix ('lin' , 'col') | orthBase |
| A vectorial comparative method to amino acid sequence. | sWeeP sWeeP,AAStringSet-method sWeeP,character-method |
