Package: plier 1.77.0

Crispin Miller

plier: Implements the Affymetrix PLIER algorithm

The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.

Authors:Affymetrix Inc., Crispin J Miller, PICR

plier_1.77.0.tar.gz
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plier.pdf |plier.html
plier/json (API)

# Install 'plier' in R:
install.packages('plier', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • c++– GNU Standard C++ Library v3

On BioConductor:plier-1.77.0(bioc 3.21)plier-1.76.0(bioc 3.20)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwarecpp

4.14 score 115 scripts 376 downloads 6 mentions 1 exports 7 dependencies

Last updated 4 months agofrom:f4e9849e33. Checks:1 OK, 1 NOTE, 9 WARNING. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKFeb 28 2025
R-4.5-win-x86_64WARNINGFeb 28 2025
R-4.5-mac-x86_64WARNINGFeb 28 2025
R-4.5-mac-aarch64WARNINGFeb 28 2025
R-4.5-linux-x86_64NOTEFeb 28 2025
R-4.4-win-x86_64WARNINGFeb 28 2025
R-4.4-mac-x86_64WARNINGFeb 28 2025
R-4.4-mac-aarch64WARNINGFeb 28 2025
R-4.3-win-x86_64WARNINGFeb 28 2025
R-4.3-mac-x86_64WARNINGFeb 28 2025
R-4.3-mac-aarch64WARNINGFeb 28 2025

Exports:justPlier

Dependencies:affyaffyioBiobaseBiocGenericsBiocManagergenericspreprocessCore