Package: plier 1.83.0

Crispin Miller

plier: Implements the Affymetrix PLIER algorithm

The PLIER (Probe Logarithmic Error Intensity Estimate) method produces an improved signal by accounting for experimentally observed patterns in probe behavior and handling error at the appropriately at low and high signal values.

Authors:Affymetrix Inc., Crispin J Miller, PICR

plier_1.83.0.tar.gz
plier_1.83.0.zip(r-4.7)plier_1.83.0.zip(r-4.6)plier_1.83.0.zip(r-4.5)
plier_1.83.0.tgz(r-4.6-x86_64)plier_1.83.0.tgz(r-4.6-arm64)plier_1.83.0.tgz(r-4.5-x86_64)plier_1.83.0.tgz(r-4.5-arm64)
plier_1.83.0.tar.gz(r-4.7-arm64)plier_1.83.0.tar.gz(r-4.7-x86_64)plier_1.83.0.tar.gz(r-4.6-arm64)plier_1.83.0.tar.gz(r-4.6-x86_64)
plier_1.83.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html
DESCRIPTION
card.svg |card.png
plier/json (API)

# Install 'plier' in R:
install.packages('plier', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))
Uses libs:
  • c++– GNU Standard C++ Library v3

On BioConductor:plier-1.83.0(bioc 3.24)plier-1.82.0(bioc 3.23)

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

softwarecpp

4.28 score 158 scripts 6 mentions 1 exports 7 dependencies

Last updated from:a942244e61. Checks:1 ERROR, 4 NOTE, 2 OK, 7 WARNING. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksERROR145
linux-devel-arm64NOTE136
linux-devel-x86_64NOTE138
source / vignettesOK157
linux-release-arm64NOTE129
linux-release-x86_64NOTE131
macos-release-arm64WARNING92
macos-release-x86_64WARNING469
macos-oldrel-arm64WARNING100
macos-oldrel-x86_64WARNING202
windows-develWARNING85
windows-releaseWARNING66
windows-oldrelWARNING83
wasm-releaseOK102

Exports:justPlier

Dependencies:affyaffyioBiobaseBiocGenericsBiocManagergenericspreprocessCore