Package: planet 1.21.0

Victor Yuan

planet: Placental DNA methylation analysis tools

This package contains R functions to predict biological variables to from placnetal DNA methylation data generated from infinium arrays. This includes inferring ethnicity/ancestry, gestational age, and cell composition from placental DNA methylation array (450k/850k) data.

Authors:Victor Yuan [aut, cre], Wendy P. Robinson [aut, ctb], Icíar Fernández-Boyano [aut, ctb]

planet_1.21.0.tar.gz
planet_1.21.0.zip(r-4.7)planet_1.21.0.zip(r-4.6)planet_1.21.0.zip(r-4.5)
planet_1.21.0.tgz(r-4.6-any)planet_1.21.0.tgz(r-4.5-any)
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planet_1.21.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
planet/json (API)
NEWS

# Install 'planet' in R:
install.packages('planet', repos = c('https://bioc.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/wvictor14/planet/issues

Pkgdown/docs site:https://victoryuan.com

Datasets:

On BioConductor:planet-1.21.0(bioc 3.24)planet-1.20.0(bioc 3.23)

softwaredifferentialmethylationepigeneticsmicroarraymethylationarraydnamethylationcpgislandancestrydna-methylation-datageneticsinferencemachine-learningplacenta

6.14 score 4 stars 1 packages 38 scripts 534 downloads 1 mentions 4 exports 15 dependencies

Last updated from:8086bc5eb5. Checks:1 WARNING, 7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
bioc-checksWARNING180
linux-devel-x86_64NOTE260
source / vignettesOK282
linux-release-x86_64NOTE256
macos-release-arm64NOTE164
macos-oldrel-arm64NOTE172
windows-develNOTE176
windows-releaseNOTE161
windows-oldrelNOTE162
wasm-releaseOK163

Exports:%>%predictAgepredictEthnicitypredictPreeclampsia

Dependencies:clidplyrgenericsgluelifecyclemagrittrpillarpkgconfigR6rlangtibbletidyselectutf8vctrswithr

planet

Rendered fromplanet.Rmdusingknitr::rmarkdownon May 30 2026.

Last update: 2025-02-01
Started: 2021-03-10