# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "planet" in publications use:'
type: software
license: GPL-2.0-only
title: 'planet: Placental DNA methylation analysis tools'
version: 1.13.0
doi: 10.18129/B9.bioc.planet
abstract: This package contains R functions to predict biological variables to from
  placnetal DNA methylation data generated from infinium arrays. This includes inferring
  ethnicity/ancestry, gestational age, and cell composition from placental DNA methylation
  array (450k/850k) data.
authors:
- family-names: Yuan
  given-names: Victor
  email: victor.2wy@gmail.com
preferred-citation:
  type: manual
  title: Placental DNA methylation analysis tools
  authors:
  - family-names: Yuan
    given-names: Victor
    email: victor.2wy@gmail.com
  year: '2024'
  url: http://www.bioconductor.org/packages/planet
  notes: https://github.com/wvictor14/planet - R package version 1.13.0
  doi: 10.18129/B9.bioc.planet
repository: https://bioc.r-universe.dev
repository-code: http://github.com/wvictor14/planet
url: https://victor.rbind.io/planet
contact:
- family-names: Yuan
  given-names: Victor
  email: victor.2wy@gmail.com
references:
- type: article
  title: Accurate ethnicity prediction from placental DNA methylation data
  authors:
  - family-names: Yuan
    given-names: Victor
  - family-names: Price
    given-names: Magda E.
  - family-names: Del Gobbo
    given-names: Giulia
  - family-names: Mostafavi
    given-names: Sara
  - family-names: Cox
    given-names: Brian
  - family-names: Binder
    given-names: Alexandra M.
  - family-names: Michels
    given-names: Karin B.
  - family-names: Marsit
    given-names: Carmen
  - family-names: Robinson
    given-names: Wendy P.
  year: '2019'
  journal: BMC Epigenetics & Chromatin
  doi: 10.1186/s13072-019-0296-3
  url: https://epigeneticsandchromatin.biomedcentral.com/articles/10.1186/s13072-019-0296-3
- type: article
  title: 'Placental epigenetic clocks: estimating gestational age using placental
    DNA methylation levels'
  authors:
  - family-names: Lee
    given-names: Yunsung
  - family-names: Choufani
    given-names: Sanaa
  - family-names: Weksberg
    given-names: Rosanna
  - family-names: Wilson
    given-names: Samantha L.
  - family-names: Yuan
    given-names: Victor
  - family-names: Burt
    given-names: Amber
  - family-names: Marsit
    given-names: Carmen
  - family-names: Lu
    given-names: Ake T.
  - family-names: Ritz
    given-names: Beate
  - family-names: Bohlin
    given-names: Jon
  - family-names: Gjessing
    given-names: Hakon K.
  - family-names: Harris
    given-names: Jennifer R.
  - family-names: Magnus
    given-names: Per
  - family-names: Binder
    given-names: Alexandra M.
  - family-names: Robinson
    given-names: Wendy P.
  - family-names: Jugessur
    given-names: Astanand
  - family-names: Horvath
    given-names: Steve
  year: '2019'
  journal: Aging (Albany NY)
  doi: 10.18632/aging.102049
  url: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6628997/
- type: article
  title: Cell-specific characterization of the placental methylome
  authors:
  - family-names: Yuan
    given-names: Victor
  - family-names: Hui
    given-names: Desmond
  - family-names: Penaherrera
    given-names: Maria S.
  - family-names: Beristain
    given-names: Alexander G.
  - family-names: Robinson
    given-names: Wendy P.
  year: '2021'
  journal: BMC Genomics
  doi: 10.1186/s12864-020-07186-6
  url: https://bmcgenomics.biomedcentral.com/articles/10.1186/s12864-020-07186-6